Dehalococcoides mccartyi 195: DET0981
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Entry
DET0981 CDS
T00223
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
det
Dehalococcoides mccartyi 195
Brite
KEGG Orthology (KO) [BR:
det00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
det03016
]
DET0981 (truB)
Enzymes [BR:
det01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DET0981 (truB)
Transfer RNA biogenesis [BR:
det03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DET0981 (truB)
Prokaryotic type
DET0981 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAW39800
UniProt:
Q3Z7U5
LinkDB
All DBs
Position
complement(900192..901094)
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AA seq
300 aa
AA seq
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MNGILNINKPPGLTSFGVVSKVRHIYSQKKVGHGGMLDPSATGVIPVFLGSATRLIEYLS
SVRKTYLAEIELGTETDSYDSEGEITSRKSCEHITADMVRNALPDFLGEITQIPPMYSAV
KHRGVRLYNLARQGIEVERNPRKAAIYGIEFLGFASPVLRLRIECGHGTYIRSIAFDLGR
KLGCGAYLKTLVRESYGPFHLTTSLDLADLEAAENKGRLADILLPPEAAVGHLPRITLDD
ESITRLVNGLEIRLEMTGQPEAMAVYSAENRFAAVIRPETDGSWHPAKVFLSPCPKKNAD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcatcttgaatatcaacaaacctccaggtttgacctctttcggggtggtctca
aaagtaaggcatatttactcccagaaaaaggtagggcatggcggtatgcttgacccgagt
gccaccggggttatacctgtttttctgggaagcgcaacccgcctgatagagtacctttct
tcagtccgcaaaacctatctggctgaaatagagctgggtacggagacagatagctacgat
agcgaaggggagattacttcccgaaagagctgtgaacatattactgctgatatggtgcgt
aatgctttgccggattttctgggtgagataacccagattccccccatgtacagtgcggta
aaacaccgcggggttcgcctgtataacctggccaggcaggggatagaggttgaaagaaac
ccgcgtaaagctgcgatttacggcattgaattcctcggttttgcttcacctgtgctgcgt
ttgcggatagagtgcggacacggtacgtatatacgttctatagcctttgatttaggcagg
aaactgggctgcggggcatatttgaaaaccctggtcagggaatcttacggcccattccac
cttacaacttcacttgatttggctgaccttgaagcggctgaaaataaaggaaggctggca
gatattctgctgccgccggaagccgccgtagggcatttgccgcgtataacccttgatgat
gaaagtataacccggctggtaaacgggttggaaataaggctggaaatgaccgggcagccg
gaagctatggcggtgtatagcgctgaaaaccgctttgcggctgtaatccgccctgaaact
gacggcagctggcaccctgccaaagtcttcctgagcccatgccctaaaaagaatgcggat
tag
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