Dehalococcoides mccartyi 195: DET1391
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Entry
DET1391 CDS
T00223
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
det
Dehalococcoides mccartyi 195
Pathway
det03030
DNA replication
det03410
Base excision repair
det03420
Nucleotide excision repair
det03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
det00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DET1391 (polA)
03410 Base excision repair
DET1391 (polA)
03420 Nucleotide excision repair
DET1391 (polA)
03440 Homologous recombination
DET1391 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
det03032
]
DET1391 (polA)
03400 DNA repair and recombination proteins [BR:
det03400
]
DET1391 (polA)
Enzymes [BR:
det01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DET1391 (polA)
DNA replication proteins [BR:
det03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DET1391 (polA)
DNA repair and recombination proteins [BR:
det03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DET1391 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DET1391 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH
RecR_HhH
nSTAND_NTPase4
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AAW39375
UniProt:
Q3Z6P9
LinkDB
All DBs
Position
complement(1256490..1259201)
Genome browser
AA seq
903 aa
AA seq
DB search
MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DRKGPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEVAVRAKYGLGPEHI
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARDSKILTTIVCDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGENQLQGTP
DMFAVASKVETRYMVADSQNIDSIVSRLANAKELALAVSGTPEEAMDARLTALALSSAAG
DACFVPAEFIGSASEGQMFAAEGHSGLAALLGDEKISKTAHNAKYLMNLLLSAGQAVKGL
DFDTMIAAHLLGEKNLAIKDLVFEHFGIEIADIENILTRNGKKASFSEVQLSEAAQLAAD
YTFRLKGIFAAQLAETRLMDLFARVEMPLLPILLGMERTGIMLDTDLLKAMAEKTGRQIF
KLEEDIYARAGHNFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLEELKGKHRIVD
LILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPPGTVLLAGDYSQIDLRVLAHLSQDPALIEAFQSDQDIHTATAARLLNIP
PSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAVYFSEI
KQQVRTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KLKEEKLKSRLLLQVHDELIFEVPKTELGRMSDLLVETMSGAVAFEIPLKVELKSGANWG
DME
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaatagtcctctttgacggcactaaccttgttcaccgggcatatcat
gtacttcctccgcttgccatccgcaaaacaggtgaagtagtgggtgccgcttttggtttc
gcctccatactgattaaagtcttaacagaccttaaaccggattgttatgccatatccttt
gacagaaaaggcccaaccttccgccatgaaatgttcaaagcatacaaagcccagcgtccg
cccatgcctgacgaactggtcagccagctggggcgggtacgccagattgtagatgctttt
aatatgccggtatacgaacagagcggctttgaggctgatgatgtgctgggtacgctggca
accagagccgctgccgcaggtatggaggttattatagcctccggggacgcagactctatg
cagctggtcgggccggatatccgcattttgtatcccggtccggcaggttcttttgccagc
accagtttgtatgacgaggtggcggtaagggcaaaatacggtctggggccggagcatatt
gctgattacaaagcccttatgggtgacccttctgacaatatccccggagtacccggcata
ggcccgaaaaccgcccagaaacttatagaagagtacggcggcatagaagatatttataaa
aatctggataaaataagcccgcccggtcttcagaaaaagctggcagacaatgccgaagta
gcccgtgacagtaaaatactgactactatcgtgtgcgatttaccgcttgatttcagtatt
gaggaatgccgggcagagcactataaccgccagaaagtggtagacctattccgtgagctg
gagtttttcaggctgattgaccgcctgccgggaggggaaaaccagcttcagggtacgccg
gatatgttcgctgttgcttcaaaggttgagacccgctatatggtggcagacagccaaaat
atagacagtattgtaagccgcctggcaaatgccaaagagctggcgctggcggtttcgggt
actcccgaagaagctatggatgcccgcctgacggcactggcactttcaagtgcggcgggt
gatgcctgttttgtacccgctgagtttatcggcagtgcttcagaagggcagatgtttgcc
gccgaagggcattccggcttggcagctctgcttggtgatgaaaaaataagtaaaaccgcc
cataacgccaagtaccttatgaatttgcttttatctgccgggcaggcagtaaaagggctg
gattttgatacaatgattgccgcccatcttctgggtgaaaaaaatctggctatcaaagac
cttgtctttgagcatttcggcatagagattgcggatattgaaaatatactgacccgaaac
ggtaaaaaagccagtttcagcgaggttcagctttcagaagcggctcagcttgcggctgat
tacactttccgcctcaaaggtatctttgccgcccagcttgccgaaaccaggctgatggat
ttatttgccagggtggaaatgccccttttgcccatactgctgggcatggaacgcaccggc
attatgctggatacagatttgctgaaggctatggctgaaaagacaggcaggcagatattt
aaactggaagaagatatctatgcccgggccgggcataactttaacataggctcccctcag
cagctggggcggatactctttgacgaactgaaactgccggttatcaaaaagaccaaaacc
ggctattccaccggggcagaggtgcttgaagaactgaagggcaagcaccgtattgtagac
ctgatactggaataccgtatgctggtaaagctgaaatctacttatctggataccctgccg
cgtatggtaaatccgcatacccggcggctgcataccagttttaatcagacccgtacagct
accggcaggttatcttcttccgagcctaatttgcaaaacatacctgtcaggggggaaatg
ggcagggagatacggcgggcatttattgcacctcccggcacagtgctgctggcgggagat
tactcccaaatagacctcagggtgctggcccatctttcccaggaccccgccctgatagag
gctttccaaagtgaccaggatattcacaccgctaccgccgccagattgctgaacattccc
ccgtcaaaggtgactaaagaacaacgccgcttggctaaaacggtaaatttcggggtgata
tacggcatgagcagctacgggttggaacaggctaccgagctttcgctggaagaagccgac
aaatttataaaagcctattttgaaaaatatccgcgggtggctgtttatttctcggagatt
aagcagcaggtgcgtactcagggttatgtggaaaccctgctgggcagacgccgctatata
ccggaaatcaattcacccaaccgtattttgcgtgaatcagccgagcgtatggctatcaat
atgccggtacaggggacatctgctgacattatcaagctggctatggtccggctggacgaa
aagcttaaagaagaaaagctgaaaagccgcctgcttcttcaggtgcatgacgagcttata
tttgaagtacccaagacagagcttgggcggatgagtgatttgcttgtagaaaccatgtca
ggtgcagttgcctttgaaataccgctcaaggttgagcttaagtccggggctaactgggga
gatatggagtaa
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