Dehalococcoides mccartyi 195: DET1494
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Entry
DET1494 CDS
T00223
Name
(GenBank) peptide ABC transporter, periplasmic peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
det
Dehalococcoides mccartyi 195
Pathway
det02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
det00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DET1494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
det02000
]
DET1494
Transporters [BR:
det02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DET1494
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AAW39311
UniProt:
Q3Z6F5
LinkDB
All DBs
Position
complement(1351334..1352965)
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AA seq
543 aa
AA seq
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MIKNWKKFKKVWLIGLAAVISLSLFAGCEQTTPNADDTATAITLKVGSTKPFKTTNRFSD
YWYGVLTNLTTHDSLIRLGDDMSIKPWLAKSWTVSDDAKTFVFTIADNAYWHDGTKLTAE
DVAFSVEYYRDYIASASWMKDVIADVSFSGDTVTLSLSRPYGNLLTEFMTYSIVPKHIWQ
DVTDPLKYNQTDMTVGSGPFVFESFDLSSGKFIFKANEDYFQGKPTIDRLEVDIYQNMDA
LVLSLAKGDIDTWWDYSGTFPYTSIPALIKSSKVDFETSTYLGVPSALGFNLEDGPASDI
NVRKAIAAAINYQQIIEYFYAGYGSVPTTGFVPPTHPNFNADLPSLAYNPAEANALLDAA
GLLDTDGDGIREDSSGQNISLRLLARSDQSTNMRLAEILRDALSEIGLGVEIRALDLSAW
ASVKDALDYDMVLFGATPWGTLMHAGHGSGYFDSRRTGQGVLHNLDAAEYLAACDARLAT
ADPAQQAVLDLRIQELTAEYLPGIALAWTESVYPYRQGWSGWVIDSIYGGVFNGFSFLSV
QSP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaaattggaaaaagtttaagaaagtctggcttatcggtctggcggcagtgata
tcgctaagcctgtttgctggctgtgagcagacaacacccaatgcagatgatactgccacg
gctattaccctgaaggtcggttctaccaaacccttcaagacgaccaaccgcttcagtgac
tactggtacggggtgttgactaacctgactacccatgacagcctgataaggctgggggat
gacatgtccatcaagccctggctggccaaatcatggacagtgtcagatgacgctaagaca
tttgtttttaccattgcggataatgcctactggcatgacggcactaagctgacggctgaa
gatgtggccttttctgtggaatactaccgtgattacattgcttcggccagctggatgaaa
gatgtaatagctgatgtcagcttttcgggggatacagttaccctttctctgtcccgtccc
tacggtaaccttctgaccgaatttatgacctattccattgtccccaaacatatctggcag
gatgtgactgacccgcttaagtataaccagacggatatgacagtcggttcgggtccgttc
gtatttgaaagttttgacctttcttccggcaagtttatcttcaaggctaacgaagactat
tttcagggcaagcccaccattgaccgccttgaggtggatatttaccagaatatggacgct
ttggttttatcacttgccaaaggtgatatagatacctggtgggattactccgggactttc
ccctataccagcatacccgccctgataaagtccagtaaggtggactttgagaccagtacc
tatctgggtgtgccgtctgcgctgggttttaaccttgaagacggccctgccagcgatata
aatgtccgcaaggctattgcggcggctataaactaccagcagataatagaatacttttat
gcgggctacggtagtgtgcctaccaccggttttgttccccccacccaccccaatttcaat
gctgacctgccttctctggcatataatcctgcagaggccaatgccctgctggatgcggcc
ggactgctggatacagatggggatggtatccgtgaggattcatccggacagaatatttcc
ctgagactgctggccagatctgaccagtctaccaatatgcgtctggctgaaatactgcgg
gatgccctgtctgagattgggcttggggtagagataagagccctggacctttcggcttgg
gcttcggtaaaagatgcacttgactacgatatggttctgttcggggctactccttggggt
actctgatgcatgccgggcatggttcggggtactttgactccagacgtaccggtcagggt
gttttgcacaatctggacgcggctgaatatctggccgcctgtgacgccagactggctacg
gctgaccctgcccagcaggcggtgcttgacctccggatacaggaacttaccgccgagtat
ctgccgggtattgccctggcctggactgagagtgtctacccttaccggcagggttggtca
ggctgggtgatagatagtatctatggcggggtgtttaacggattttccttcttgagtgtc
cagtccccctag
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