Dehalogenimonas etheniformans: HX448_00555
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Entry
HX448_00555 CDS
T08265
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
deth
Dehalogenimonas etheniformans
Pathway
deth03030
DNA replication
deth03430
Mismatch repair
deth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX448_00555
03430 Mismatch repair
HX448_00555
03440 Homologous recombination
HX448_00555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deth03032
]
HX448_00555
03400 DNA repair and recombination proteins [BR:
deth03400
]
HX448_00555
Enzymes [BR:
deth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX448_00555
DNA replication proteins [BR:
deth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HX448_00555
DNA repair and recombination proteins [BR:
deth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HX448_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
LptD_N
SGF29_Tudor
Motif
Other DBs
NCBI-ProteinID:
QNT75287
LinkDB
All DBs
Position
1867936..1871589
Genome browser
AA seq
1217 aa
AA seq
DB search
MFTHLHVHTEFSLLDGMCRIRDIVCRAKELGMTALAITDHGNMYGALKFYKECKAQGIKP
IIGCEVYVAPGSRLDKAAADKNHRHLVLLAKNKTGYQNLLKLVSIANTEGYYYKPRVDKE
ILAKYREGLIALSACPSGEVPRFILENRLDDARKAAAWYRDNFNGEFYFEIQRHPMPEFD
RINGALVRISKELNIPLVATGDVHYPRKEDATIHDLLLCIGTSTTVQDSSRMRMQADSFY
LKTEAEMAELYRDLPEALANTNKIADACDLTLEFGRLHLPQIDRPSGFSSFQYLTNLCQE
ALPKYYANPSDAVKDRLAYELDVIDKTQFADYFLVVWDIIRFVKERGIYYGVRGSAAASI
VLRCLGITEVDPLEYSLVFERFLNIERKEMPDIDMDFQDDRREEVIEYVSEKYGIDHVAQ
IITFGTLGARAAIRDVGRALGMNLPDVDRVARLVPFGPHMTLETALEENSELRDAVGNDG
TVQRLVSTAQQVSGLSRHASTHAAGVVISKEPLALHAPLQRLNRESAAGGKVELVMTQYT
MEDIALIGLLKMDFLGLANLTILSRAQEIIRERTGIPLDVHKLPLDDKKTFALLSAGETM
GVFQLEGVGMRRYIRDLKPTHFTDIAAMVALYRPGPMEQIPRFIRSKHGDEPITYPHPAL
EPILRETYGVIVYQEQVLFIAQKFSGFSLGQADILRKAMGKKNAEVMQKQKKNFIAGAVK
NGYTEDMAEQIFALIEPFAGYAFNKAHAVSYALIAYQTAYLKANYPVEYMAAFMATQRDD
AEKVAVAAAEARRLGIELLSPDINASEVNFTIEENDKGSAIRFGLATVKNVGEQAVAPLV
EERHKNGAYRSIEDFCRRAEASVLNRRVLESLIKAGAFDSLGDRGTLLHNVGRLLDFAAR
ELRIRQSGQGTLFDLFGGVAEVPSAPLEMETMAVPQKEQLIWEKELLGVYVSAHPFCQFV
NKIGRDTTALCGEISEELDGQLVTIAGLVASARTSQTRDGKTFATVELEDLNGRTEVVAW
PRLYEQTKDFWQEGKVLLIEGKVSFRGDRGSIHADAVQVYQPNAETETVEAGQMVRIKPQ
GTNFHQGRGDFSSRPPAPPKVQSKPATPPQPKIESAPVVAMETKVQEKETPRQMSRRMLI
SLTQSDNVEADLKVFNRLMDVLAVYPGPESLTLQITCPDKMYHLRLPQVKITCNDALLEE
VESILGEGCARFENNGH
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccacctgcacgttcatacagaattcagccttcttgacggcatgtgccgcatc
agggatatcgtgtgtcgtgccaaagaattgggtatgaccgccttggccatcaccgaccat
ggcaacatgtacggcgcgctcaagttttacaaagagtgcaaggcgcagggaatcaagcct
atcattggctgcgaggtttacgtggctcccgggtccaggctggacaaagccgccgcagac
aagaaccaccgtcacctggtgcttctagcgaagaacaaaaccggctaccagaatctatta
aaactggtatccatcgcgaacaccgaaggctactactacaaaccccgcgtcgataaagaa
attttggcgaaatatcgagaaggattgatagccctctccgcatgcccctcgggcgaagtg
ccgcgctttatcctcgaaaaccgcctcgacgacgccaggaaggcggcagcctggtaccgt
gacaatttcaacggcgagttctacttcgagattcagcgccaccctatgcctgagttcgat
cggatcaacggcgctctggtcagaatctcaaaggaattgaatattcccctagtggctacc
ggcgacgtccattatccgcgcaaggaagacgccaccatccacgacctgcttctatgcata
ggcaccagcaccaccgtgcaggactcttcccggatgcggatgcaggcggattctttctat
ctcaaaacagaagccgaaatggcggaactttaccgagacctccccgaggctttggccaat
accaacaagattgccgacgcatgtgacctgacactggaattcggccggctgcacctgccg
cagatcgatcgtcctagcggatttagttcattccaatatctaacgaatttatgccaggaa
gctttaccgaaatactatgctaatccgtccgacgcggttaaggataggctggcttacgag
ctcgacgtcatcgataaaactcaattcgccgactacttcttggtggtctgggacattatt
cgcttcgtcaaagagcgtggcatctactacggcgtacgcggctcggccgcggcttccatc
gttctcaggtgccttggtataaccgaggtcgatccactggaatactcactggtattcgag
cgtttcctgaatatcgagcgtaaggaaatgcctgatatcgacatggacttccaggacgac
cgccgcgaagaagttatcgaatatgtgtccgaaaagtacggcatcgaccatgtcgcccag
atcatcacctttggcaccctcggcgcacgcgcggccatccgcgacgtcggccgcgcgctg
ggcatgaacttgccggatgtcgatagggtggcacgactagtacccttcgggcctcatatg
actcttgaaactgccctcgaagaaaactcggaactcagagatgctgttggcaacgatggc
acagtgcaaagattggtgtcgactgcccagcaggtatccggtttatcgaggcacgccagc
acccacgccgcgggggtagtgatatcaaaagaaccactcgccttgcatgcaccgctgcag
cgccttaaccgcgagagcgccgctggcggcaaggtggaactggtcatgacccagtacacc
atggaggatatcgccctcatcggcttgctcaagatggatttcctggggctggccaacctc
acaatcctgtcgagagcgcaggaaatcatacgtgaacgaactgggataccgctggatgtc
cacaagcttccgctggatgacaagaaaaccttcgcgctactttcagccggcgaaacaatg
ggggtgttccagcttgaaggcgttggcatgcgccgttacatcagggacctgaagccaact
catttcactgacatcgccgccatggtcgccctttaccgacccggtccgatggagcagatc
ccgcgctttatccggagcaagcacggcgatgagccaatcacctacccacatcctgcgctg
gagccgatcctccgggagacgtacggcgtaatcgtctaccaggagcaggtgctgttcatt
gcccagaaattctccggcttctccctgggccaggccgacatcctgcgaaaagccatgggc
aagaagaacgccgaggtgatgcagaagcagaaaaagaacttcatcgccggcgcggtcaaa
aacggctacaccgaagacatggcagagcaaatctttgccctcatcgaacccttcgcggga
tacgccttcaacaaagcacatgccgtgtcctacgccctcattgcttaccagactgcctac
ctcaaagcgaactatcccgtggagtacatggcggcttttatggccacccagcgcgatgat
gccgaaaaagtagccgtcgccgccgccgaagcccgccgccttggcattgaattgctttca
ccagatatcaacgcctcagaggtcaacttcactatcgaagaaaatgataaaggttcggcc
atccgcttcggtctcgccacggtcaaaaacgtcggcgagcaggcagtggcgcctttggtt
gaagaacggcacaagaacggggcttatcgttcgatcgaagacttctgccggcgcgcggag
gcctcggtgttgaaccgtcgcgtgcttgagagcctgatcaaagccggagcttttgattcc
ttgggagaccgtggcactctgcttcacaatgtcggcaggctgctcgattttgcagcaagg
gagctgcgcatccgtcagtctggacagggcacccttttcgacctttttggtggcgttgcc
gaagtgccctccgccccattggaaatggaaacgatggccgtgcctcaaaaagagcagttg
atttgggaaaaggaactgctcggcgtttatgtctcagcgcatcccttctgccaatttgtt
aacaagatcgggcgagataccactgctctttgcggtgagatctctgaggaactcgacggc
cagttggttaccattgccggcttggtcgcttcagcgagaacatcgcaaacccgggatgga
aaaacgtttgccaccgttgaactggaagatctgaacggacggaccgaagtagtcgcctgg
ccccggctttacgaacagaccaaagacttctggcaggaaggcaaagttcttctcatcgaa
ggaaaagtgtccttccgcggcgatcggggttcgatccacgcggacgcggtgcaggtctat
cagccaaacgctgaaactgaaaccgtcgaggccggacaaatggtcaggatcaaaccgcag
ggtaccaacttccatcaaggcagaggggacttttcatccaggcctcccgctcctccgaaa
gttcaatctaaaccggcgaccccgcctcaacccaagatcgaatccgcgcccgttgtcgca
atggaaaccaaagttcaagagaaggaaacaccgcgtcaaatgtcacgtcgcatgctgatc
tccctgactcaatccgataatgtcgaagctgatttgaaggtcttcaaccgcttaatggat
gtccttgcggtttacccgggtcctgaaagcctgacgcttcagattacctgcccggataag
atgtaccatctgaggcttccacaggttaaaataacgtgtaacgacgctcttttggaagag
gtcgaatccattctcggtgaaggttgtgccagattcgaaaacaacggacattga
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