Dehalogenimonas etheniformans: HX448_04765
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Entry
HX448_04765 CDS
T08265
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
deth
Dehalogenimonas etheniformans
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
deth03009
]
HX448_04765 (rimO)
Enzymes [BR:
deth01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HX448_04765 (rimO)
Ribosome biogenesis [BR:
deth03009
]
Prokaryotic type
ribosomal protein modification factors
HX448_04765 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNT76051
LinkDB
All DBs
Position
618604..619932
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AA seq
442 aa
AA seq
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MNENTFQIVSLGCAKNTVDADSMAQLLTAAGYQHVDSQRRAKVIIVNTCGFMTSATEESY
AELAKLASRKKKGQILIAAGCLAERYGEGVTTRIPGVDAVLGTRRWVDIAGLVLELTKAE
AAGIHVGTTGGEETGVKRVTVQGASAYLKIADGCSRQCAFCAIPLIKGPTVSRPMESIVS
EAVFLQQRGVREIVLLAQNTTDYGLDLGLKNGLVQLLRKMTAAAPGVDWLRIMYAFPGGV
TDELIEVMATNKQIVPYIDLPLQHAHPDVLRRMGRPADIDWVYRTLEKMHKAIPDLAIRS
TFIIGYPDETESEFQYLLDFIGEIRFDKLGTFKFSFEKGTPAETLGDPISDIIKEERLKR
LMEKQQQISLERNRSFIGRDLKVLVEGSGDGISIGRSYRDAPEVDGLVIVKRQIPSGEMI
QVHIDDAMVYDLRGSPVSNVKT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaatacattccaaattgtttccttaggctgcgccaaaaacactgtcgatgcc
gattccatggcccagttattgacagcggccggatatcagcatgtggattctcagcggcgg
gcaaaagtcataattgtcaatacctgcggttttatgacctccgctaccgaggaatcgtac
gcggagttagccaaactggcgtcgcggaagaaaaaagggcaaatcctgatcgcggctgga
tgcctggcagagcgctacggcgagggtgtgaccacaaggataccgggcgttgatgccgtg
ctcggcacccgccgctgggtggacatcgccggtctagttcttgagcttaccaaagcagaa
gccgccggcatccatgttggcacaaccggtggcgaggaaacgggtgtcaaacgcgtgacg
gtgcaaggcgccagcgcatacctgaagattgccgacggctgctcgcggcagtgcgctttc
tgcgccatcccgctgatcaagggaccgacggtcagccggcctatggagtcgatcgtgtca
gaagccgtctttctgcaacaacggggagtcagggaaatagttttacttgcccagaatacg
acggactacgggctcgatctcggcctaaagaacggattggtgcagttgcttcgtaaaatg
accgccgccgcgccgggcgtggactggctccggatcatgtacgcttttccgggcggagtg
accgatgaactcatcgaagtcatggcaacgaacaagcagatcgtgccctatatcgatctg
ccgctgcagcatgcccatccggacgtgctgcggcgcatggggcggcctgcagacatagat
tgggtctatagaacgctcgagaagatgcacaaggctatacctgacctggctatccggagc
acctttatcatcggctacccggatgaaacagaatcagaattccagtatttgctcgatttt
atcggcgagattcgcttcgacaaacttggcacgttcaagttctcttttgaaaaaggcaca
ccggctgaaacgctcggtgatccaatatccgatatcatcaaagaagaacgtctgaaacgt
cttatggaaaaacaacaacaaatatctctcgaacgcaaccggagtttcatcgggcgagac
ctgaaggtgctggtcgagggtagcggcgatgggatttcgatcggtcgtagctatcgcgac
gctccagaagtcgacggcctggtgatcgtcaaaaggcaaatcccgtcgggggaaatgatt
caagttcacatcgacgacgcgatggtttacgacctgagggggtcgccggtttcgaatgtg
aaaacctga
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