Dehalogenimonas etheniformans: HX448_06350
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Entry
HX448_06350 CDS
T08265
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
deth
Dehalogenimonas etheniformans
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deth03016
]
HX448_06350
Enzymes [BR:
deth01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
HX448_06350
Transfer RNA biogenesis [BR:
deth03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HX448_06350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
QNT76332
LinkDB
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Position
complement(934217..935590)
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AA seq
457 aa
AA seq
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MKKFTRTISGVTPVAVMSRPSPCPGHCVYCPDFSGTPRSYTPHSPAVMRAVRYDYDPEEQ
IKARLRILSDMGHPTDKVELIVMGGTFLATPIEYQNCFIKACYDVLNGVGSTSLEDAQRI
NESALNRVVGLCIETRPDVCGEREVDRMITWGTTRVELGVQTLDDEIYRLINRGHRVSAV
IEASARLRRAGLKVHYHWMPGLPGSNPGHDLLMTQRLFSDQDFQPDGIKIYPTMVIENTE
LELWQRENRYQPYEDDVMVGLIAEMKINVPPYVRISRVLRDIPAEYITGGLKNSLRDGLK
DRLDAQGFTCRCIRCREYGHRPMRPGVQPSLRRLEYDASGGKEIFLSYEDEYDTLYGLIR
LRIQPQAPDNLRILGDRVALVRELHVYGRELQIGAKGNLSAQHQGLGRQLLYHAEEIAHE
EFGASFVAILSGVGARNYYRDLGYQLASGYMIKSINH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttacccggacaatttctggggtaaccccggtagcagtaatgagccggcct
tctccatgtcctgggcattgcgtctattgcccggatttttcaggaacgccccgcagttac
acccctcattctccagcggtgatgcgcgcggtcaggtacgattatgatccggaggagcag
attaaggcgcgcctccgcatactgtcggacatggggcatccgaccgataaagtggaactt
atagtgatgggagggaccttccttgctactcccattgaataccaaaactgttttatcaaa
gcctgttacgatgtcctgaacggagttggcagcacttccctcgaggatgctcagcggatc
aacgaaagcgccttaaaccgggtggtgggactgtgcatcgaaaccagaccggacgtgtgc
ggggagcgcgaagtcgatcgcatgattacctggggtacgacgcgggttgaattgggagta
caaaccttagacgacgagatataccgcctgataaatcgcggacatagggtttcggcggtg
atcgaagcttcggccagattgcggcgagccggattaaaggtccattatcactggatgccg
ggcttgcccggttcaaatcccgggcatgacctattaatgacgcaacgccttttttccgac
caagatttccaacctgatggcataaaaatatatcccacaatggtaatcgaaaacacagaa
ttggaattatggcagcgtgagaatcggtaccagccatacgaagatgatgtgatggtcgga
ttgatcgcggaaatgaaaatcaatgtcccgccttatgtacggatctctagggttctaaga
gacatccccgccgaatacattacgggcggactgaaaaattcattgcgagatggcttgaag
gaccgtcttgacgcgcaaggtttcacttgccggtgcataagatgtcgagaatacggtcat
cgccccatgcgcccgggggtacaaccctccctgcgacggttggaatacgacgcatctgga
ggtaaggagattttcctttcatacgaggatgaatatgacactttgtacggtctcatacgc
ttgagaattcaacctcaagcccctgacaacctcaggatcttgggcgatcgggtagcttta
gttcgggagcttcacgtatatggacgggaactccaaattggggcaaaaggaaatctttca
gctcagcatcagggtctcgggcggcaattgctctatcatgccgaagagatcgcgcatgag
gaatttggtgcttcttttgttgcgatcttgtcaggggtgggagcccgcaattactatcgt
gacctcgggtatcagttagcttcgggctatatgattaaatccataaatcattaa
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