Dehalogenimonas etheniformans: HX448_07035
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Entry
HX448_07035 CDS
T08265
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
deth
Dehalogenimonas etheniformans
Pathway
deth03410
Base excision repair
deth03430
Mismatch repair
deth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HX448_07035 (recJ)
03430 Mismatch repair
HX448_07035 (recJ)
03440 Homologous recombination
HX448_07035 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deth03400
]
HX448_07035 (recJ)
DNA repair and recombination proteins [BR:
deth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HX448_07035 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HX448_07035 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HX448_07035 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QNT76452
LinkDB
All DBs
Position
complement(1073129..1074808)
Genome browser
AA seq
559 aa
AA seq
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MRGARWQVASAEVPPELAGHYPVLMARIMAGRGIKTLEAAELFLAGDARLSNDWRLLPDI
RPAMARIYRAILSGERIAVYGDFDTDGITATALMVTGLRSLGAEAIPYIPHRLTEGYGLK
TDALKKLAEEGVSLVVSVDCGITAVTEVKEAKRFGLDVIITDHHLPLETLPPAVAMIDPR
RVDSVYPFQDLAGVGVAFKVVEALFAGMGRPLPKEHFLELAAIGTVADIMPLTGENRYLV
KEGLKHLNDHPSPGLLEIINMARLRAGQLDAESISWQVAPRLNAAGRLEHAIMGYDLLMA
ATPDKAKDLALILEDRNLERQRLTAKFVARAREQVLSGPLDPLLLVEDAECPPGILGLVA
GRLSDEFYRPSIVIRREDGMATASCRSIPGFNITQAIDQCGHLLCHYGGHAQAAGFSLKT
EDLPKLSSLISEIAAKEIASIDLQPVLTIDTEARFHEIGGNLFQILNRLGPFGEANRPPL
FVSRCVTVLDHRTMGNAQEHIKMRLTQGGSVWEAVAFRQAEEMKKLLPGPIDVVYNLELD
KFNGRETLRLNIVDFAAAS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcggcgcccgctggcaggtagcttcagctgaggtgccgccggagcttgccggacat
tacccggtgttgatggcgcgcatcatggccgggcggggcatcaagactcttgaagccgct
gaactgtttctggctggcgacgcccgattgtcgaacgactggaggctgctgcccgacatt
cgacccgcaatggcgcgtatctatcgggctatcctttcgggagaacgcattgccgtctac
ggcgatttcgacaccgatggaatcacggcgacggcactcatggtcaccgggctcagatcc
ctcggcgccgaggcgataccttatattccgcatcggctgaccgagggttacggactgaaa
accgatgccctgaagaaactggcggaagaaggggtttcgctggttgtcagcgttgactgc
ggcattactgccgttaccgaagttaaggaagccaagcggttcgggctcgacgtcatcatc
accgaccatcatttgcctcttgaaaccctgcctcccgcggtggctatgattgatcccagg
cgtgttgattctgtataccctttccaggatttggccggcgtaggcgtcgctttcaaggta
gtcgaggctctctttgccgggatgggcagaccgttgccaaaggaacatttcctcgaactc
gcggcaatcggcactgtcgccgacatcatgcctctcaccggcgagaaccgctacctggta
aaagaaggcctgaaacatcttaatgatcatccttctccggggttgctggagattatcaac
atggcacgtctgcgggctggtcaacttgatgccgagagcatatcctggcaagtggcgcct
cgattgaatgccgccggtcggttggaacatgccataatgggctatgacctcttgatggca
gcgacacccgataaagctaaagatttagctttaatattggaagatcgaaacctagagcgc
cagaggctgactgccaagttcgtcgctcgggcgagggaacaggttttatccggtccgttg
gacccattgcttttggttgaagacgcggaatgcccgccgggcatcctcggtttggtggcg
ggacgcctgtccgatgaattttatcgcccgagcatcgtcattcgacgggaagatggcatg
gccaccgccagttgccgctctattcccggtttcaacatcacgcaagccattgaccaatgc
ggtcatcttctgtgccattacggcggccacgcccaggcggcagggttcagcctgaaaaca
gaggacttgcccaaattgtcgtctctgatatcggaaattgccgccaaagaaattgcctca
atcgatctgcaacctgtcttaacgatcgacacagaggcgcggttccacgagatcggcggc
aacttgtttcagattctaaaccgtctcggcccgttcggcgaagcaaaccggccgccgttg
ttcgtttcaaggtgtgttaccgtactcgaccacaggacgatggggaatgctcaggaacat
ataaaaatgcgtttaacccagggcggatcggtctgggaggcggtggcattccggcaagca
gaagaaatgaaaaaacttctcccgggaccgattgatgttgtatataatctggaactggac
aagtttaacgggcgcgaaaccctcaggctgaatatagtcgacttcgcagccgcaagctaa
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