Dehalogenimonas etheniformans: HX448_07265
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Entry
HX448_07265 CDS
T08265
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
deth
Dehalogenimonas etheniformans
Pathway
deth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HX448_07265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deth03019
]
HX448_07265
03016 Transfer RNA biogenesis [BR:
deth03016
]
HX448_07265
Enzymes [BR:
deth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HX448_07265
Messenger RNA biogenesis [BR:
deth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HX448_07265
Transfer RNA biogenesis [BR:
deth03016
]
Prokaryotic type
tRNA degradation factors
HX448_07265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QNT76494
LinkDB
All DBs
Position
1121612..1123804
Genome browser
AA seq
730 aa
AA seq
DB search
MASIHTFERTIGGRKLVIEHGKLAWQANGAVTLRYGDTEILTTAVIAKEAKAGTDFLPLT
IDVEERMYAAGKIPGGFIRREGRATEAATLASRLADRPIRPLLPKYWRREIQVIVTVLAA
DQENDPDVLGVIGASCALGISEMPFEGPVSAVHVGYINGKFVLNPTFSQLPESKLDVVVA
STKHAVTMLEAGAQETPEALMIEAIKFGHAANQEIIALQEEVIAAIGKAKWHVDPPVIDE
SLMEKISIAIDDRLPGAFYQADKTQRTENLEKLSQELIADLGEEFEPAAIMAAYDKKIRK
LVRSTALDRNERVSGRGITEIRELSADVSILPRVHGSSLFSRGMTQILNIITLGSLQMEQ
KLDNISPEETKRYIHHYNFPPYSTGEIKRLGGQGRREIGHGALAERALLPVIPSESEFPY
AMRLVSEAVSSNGSTSMASTCASSLSLMDAGVPIKKAVAGISIGLITDDENKDRFVTLTD
IEGLEDNYGDMDFKVAGTRDGITAIQLDIKLKGISFAVIEKTLSQAKEARMVILDVMDRA
ISQPRTELSPLAPRMYKLKIDPGKIGTVIGPGGRVIRSIIDETKTTIDIEDDGTVIIGAT
DAAAAKKAIAIVEGLTKDVEPGSVYTGKVTRIMSFGAFVEILPGKEGLVHISELANRRVD
KVEDVVKIGDMIQVKVTEIDSQGRINLSRRALLAPPTAEEAEAMRQPPPGGFPRSSPGGP
MGGGRPPFRR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ttggcatcgatccacacttttgaacgaaccatcggcgggcgtaagctcgttatcgaacac
ggcaagctggcctggcaggctaacggtgcagtcaccctgcgttacggcgataccgaaatt
ctgaccacggcggtcatcgctaaagaagccaaggccggaaccgacttcctgcctctgacc
atcgatgtcgaggaacggatgtacgccgccgggaaaattcctggtggttttatccgccgt
gaaggacgggcaaccgaagccgccacgctggccagccgcctcgccgaccgtcccatccgg
ccattgctgccgaagtactggcggcgcgagatccaggttatcgtgaccgtactcgcggca
gatcaggagaacgatcccgatgtcctgggtgtcatcggcgcatcatgcgcgttgggcatc
tccgagatgccttttgaaggaccggtttctgcggttcatgtcggttacatcaacggcaaa
ttcgtgctcaacccaaccttttcccagttacccgaaagcaagctggatgtagtagtcgcc
agcactaagcacgccgtaacgatgctggaagccggcgcccaggagacgccggaagcgctg
atgatcgaggcgatcaagttcggccacgccgccaatcaggagattatcgcccttcaggaa
gaagtgattgccgccatcggcaaagccaaatggcacgtcgatcctcccgtcatcgacgag
tctctcatggaaaaaatctcgatagcgatcgatgacagattgccgggcgccttctaccag
gcagataaaacccagcgaaccgaaaatcttgagaaattatcgcaggaattgatcgccgat
ctgggcgaagaattcgaacccgccgccattatggccgcctacgacaaaaagattcgaaaa
ctggtacgttccaccgccctggacaggaacgaacgcgtctcaggccgcggcatcaccgaa
atccgggaactatcagccgatgttagcattttaccccgcgtccatggatcttccctattc
tcccggggcatgacccagatcctgaacatcatcacgctaggttctctccagatggaacag
aagctggacaacatctcccctgaggagaccaagcgctatatccaccattacaatttcccg
ccatactccaccggtgagatcaaacggctcggcggtcagggtcgccgtgaaatcggtcat
ggggctctggctgagagggcattgttgcctgtcatcccctcggagtccgaatttccctac
gccatgcgccttgtttctgaggcggtgtcttccaacggttcaacctccatggcgtcaacc
tgtgcttccagtctttctctcatggacgccggtgtacccatcaagaaggcggtcgccggc
atctccatcggacttattaccgatgatgagaacaaggacaggttcgtcaccctgacagac
atcgaaggcctggaagacaactacggcgacatggatttcaaggtggctggtactcgagac
ggcattactgccatccaacttgatatcaagctcaaaggcatcagtttcgccgtcatcgag
aaaacgctgtctcaagctaaagaagcccgaatggtcatcctggatgtcatggacagggcc
atttctcaaccgcgcactgaactttctcctttggccccgcgaatgtataaattgaaaatc
gatcctggcaagatcggcacggttattgggcctggaggacgcgttatccgctcgatcatt
gatgagaccaaaaccaccatcgacatcgaggacgacggaacggtgatcatcggcgccacc
gatgctgctgcagctaaaaaagccatcgctatcgtagaagggctaaccaaggacgtcgaa
cctggcagcgtctacactggtaaagttacccgcattatgagcttcggagcctttgtggag
atcctgcctggtaaagaaggtctcgttcacatctccgaactcgccaaccgtcgagtcgat
aaagttgaagacgttgttaagatcggagatatgatccaggtaaaggtcaccgagatcgac
tcccaaggccggatcaacctttcccgccgtgccctgttagctcctccaacagcagaagaa
gctgaagccatgagacaaccaccgcccggcggcttcccgcgctcttcaccaggcgggccg
atgggcggcggacgacctccgttcagacgataa
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