Dehalogenimonas etheniformans: HX448_08990
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Entry
HX448_08990 CDS
T08265
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
deth
Dehalogenimonas etheniformans
Pathway
deth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HX448_08990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deth03019
]
HX448_08990
Enzymes [BR:
deth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HX448_08990
Messenger RNA biogenesis [BR:
deth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HX448_08990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
TerL_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNT76804
LinkDB
All DBs
Position
1490825..1492081
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AA seq
418 aa
AA seq
DB search
MTFESFNFHPAILSGIKTVGYTEPTPIQAQAIPPALEGRDLIGLAQTGTGKTAAFVLPML
QKLLRGPRGKLRGLIISPTRELAEQIYDAIKGLSHHTGIRSMAIYGGVGMEAQKSKLRVG
IDIVVACPGRLLDHVWQGSIDFTDVETLVIDEADRMFDMGFLPDIRKIMKCLMHERQTLL
FSATMPDDVRKLVREFLKDPVTVQIGTVAPANTVAHALYPVRQDLKTPLLKTLLKEKGMD
SVLIFTRTKHRTERVALALGQEGYAVASIQGNLSQYRRQAALDGFKDGTFKVLVATDIAS
RGIDVSDVSHVINYDMPDTADAYIHRIGRTGRIGKTGDAFTFVSAEDEPMVRALERLLKS
PIERRSLEHFKYDAPEPVKHEFARGPRPSRPTPAAPGAGERRRVPSWRRPPAAYRQPA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaatcattcaactttcatcccgctatcttgagcggtatcaaaacggtcggt
tacaccgaacccacccccatccaggctcaggctataccacccgccctggaaggccgcgat
cttatcggcctggcccaaacgggcacgggtaagaccgcagcttttgttctgccgatgctc
caaaagctgcttcgaggccctcgcggcaagcttcgcggattgatcatctcgccaactcgc
gaactcgctgagcagatttatgatgctataaaagggctgtcgcaccacactggaatacgc
agcatggccatctacggcggtgtcggcatggaagcccaaaagagcaaactgcgcgttggc
attgacattgtggtggcttgccccggacgcttgttggatcacgtctggcagggatccatt
gacttcaccgacgtcgaaacgctggtcatcgatgaggctgatcggatgttcgatatgggc
ttcctgcctgatatccgcaagatcatgaaatgcctgatgcatgaacgacagacactctta
ttctccgccactatgccagatgatgtacgcaaattggtgcgagaatttttgaaggatccg
gtgacagtgcagataggcacagtggctccggccaataccgtggctcatgccctttacccc
gtgcgccaggatcttaaaactcctctacttaaaacgttgctcaaagaaaaaggcatggac
tccgtactaatcttcacccgtaccaagcatcgcaccgaacgcgttgccctggctctaggc
caggaaggctatgccgtggcttccattcagggcaatctttctcaatatcggagacaagca
gctctggacggtttcaaggacggtacttttaaagtgctggtcgccaccgacatcgcatcc
cgcggcatcgatgtctctgatgtctcgcacgtcatcaactacgatatgccggacaccgcc
gacgcctatatccaccgcatcggccgtaccggccgaatcggcaaaaccggagatgccttc
accttcgtttctgctgaagatgagcctatggtacgagccctggaaagactgctcaaatct
ccgattgaacggcgcagcctcgagcacttcaagtacgacgcccctgagcccgttaaacat
gagtttgcccgcggccccaggccttcccgtccgacccccgccgcaccaggtgctggcgaa
cgccgtcgggtaccttcatggcgcagaccgcctgcagcctatcgccaacctgcctag
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