Desulfuromonas sp. DDH964: DBW_0301
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Entry
DBW_0301 CDS
T04368
Symbol
sbcC_1
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
deu
Desulfuromonas sp. DDH964
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_0301 (sbcC_1)
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBW_0301 (sbcC_1)
Archaeal homologous recombinant proteins
DBW_0301 (sbcC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_22
nSTAND3
ABC_tran
KELK
Baculo_PEP_C
AAA_21
NTPase_1
AAA_16
SRA_like
Motif
Other DBs
NCBI-ProteinID:
AMV70702
UniProt:
A0A143B3C9
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All DBs
Position
complement(299877..303146)
Genome browser
AA seq
1089 aa
AA seq
DB search
MKILQVRFKNLNSLVGEWQINLMHPAFASDGIFAITGPTGAGKTTILDAICLALYGRTPR
LNKVTKSGNEIMSRQTGECFAEVTFETQTGRYRCHWSQHRARKKPEGELQAPKHEIANAD
SGEIFESKIRGVADQIELATGMDFDRFTRSMLLAQGGFAAFLQAAPDDRAPILEQITGTE
IYSQISIRVHERQREEREKLNLLQAETAGIVILEPEQEQEIGQALEAKQKEETDLAAKSA
DTGKAIAWLSIIDGLNKEIVNLADEASKLQGDIEAFKPDREKLNRALNAASLDGAYATLT
ATRKQQVDDRAGLKAEEEALPGLESSAKEQAEALKSAEQQTARAKEELKAVTPTLQKVRS
LDQKLSDQIKAVSEGDEGCKKDTAKIDADKKALLEEQEKGSKAHVTLDLVDSYLKEHAQD
EWLISGLAGVEEQLGGLLSKQNEIVQKEAAQEAATTTLELATKSFDDCQKQSGIRKQALE
DASKQFQQGKDALSQMLGDRLLREYRTEKETLLREMAFLTKIAELEDHRAKLEDGKPCPL
CGATEHPFAEGNVPVPDETEKKIDALTRLISKAEDQETAIKKLEEAETLARKNLTEAEKL
ESAADNDKKAAEKALAEVKDGLVNLRADFAERRQAVTTKLQPLGIADIPEKDISSLIETL
REQLKAWQAQVKKKADIEKQIADIDSEVKRLGAVIETQSTALAEKLERLDTLKKELAAGR
DERNALYGDKNPDNEERRLNKAISDAEGAEKQARERHNELQQKWNTAKAHVESLKKRIDL
REPELRGLETEFSTALAPVGFSNEEQFLAAILPSEARVELTATAKDLDERQTDLKARQKD
RETRLAKELARKVTDKSLEELEPQFKEQEDALKELRDIIAGLKHKLCENTAAKERIKEKQ
TAIEAQKNECLRWENLHELIGSADGKKYRNFAQGLTFEMMVGHANRQLQKMTDRYLLVRD
DAQPLELNVVDNYQAGEIRSTKNLSGGESFIVSLSLALGLSHMASKKVRVDSLFLDEGFG
TLDEEALDTALETLAGLQQDGKLIGVISHVPALKERISTQIQVTPQTGGRSQISGPGCGR
LSATGQALT
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgcaggtacgcttcaagaatctgaactcactggtcggcgaatggcaaatc
aacctgatgcacccggccttcgcgtctgacggcatcttcgccataaccggtcccactggc
gcggggaaaaccacgatcctcgatgctatttgcctcgccctctacgggcggacgcctcgc
ctgaacaaggtcaccaagagcggaaacgaaatcatgtcccgccagaccggcgaatgtttt
gccgaggtgacattcgagacccagacgggacgctatcgctgccactggagccagcaccgg
gcacgcaagaaaccggaaggcgaactccaggccccgaaacacgaaattgccaatgccgat
tccggcgagattttcgaatccaagatcagaggtgtggccgatcagatcgagttggctacc
ggcatggactttgatcggttcactcgatccatgttgctggcccaaggtggctttgccgca
ttccttcaagcggcacccgatgatcgagctccgattctggagcagataacaggcacagag
atctacagccagatatccatccgcgtccacgagcgccagcgcgaagagcgggaaaaactg
aacctgctccaggctgaaacggcaggcatcgtgattcttgagccggagcaggaacaagag
attgggcaggcactcgaagcaaagcagaaggaagagacagaccttgccgccaaatccgct
gacaccgggaaggccattgcctggctctccatcatcgatgggctgaataaggaaatcgtc
aacctggccgatgaagcgagcaagctgcagggcgatatcgaggcgttcaaaccggatcgg
gaaaagctcaaccgagctttgaatgccgcctcactggacggcgcatacgcaacgctcact
gccactcgtaaacaacaggtggatgacagagcaggcttgaaagctgaggaagaggctctt
cctggactggaatcctccgccaaggaacaagccgaagcactgaaatcggctgagcaacaa
accgctcgggccaaagaagagctgaaagcggtcacgcctacattgcagaaggttcgctcc
cttgatcagaaactttccgatcagataaaggctgtttcagaaggtgatgagggctgtaaa
aaggatacggcaaagattgatgctgacaaaaaagccttgctcgaagagcaggaaaaagga
tctaaggctcatgtgacgctggatcttgttgacagctacctcaaggagcatgcacaggat
gaatggttaatcagcggtcttgctggcgttgaagaacagcttggcggtctgctctccaag
caaaatgaaatcgttcaaaaagaggctgctcaagaagcggccacgacgactctggaattg
gcgacaaagtcattcgacgactgtcagaagcaatccggcattcgaaagcaggcgctggag
gacgcctcaaaacagtttcagcagggcaaggatgctttgagccagatgctgggggaccgc
ttgttgcgagaataccgcaccgagaaggaaaccctgctgcgtgaaatggccttcctgacg
aaaattgcggagcttgaagatcaccgggcaaaactggaagacggcaagccttgtccactc
tgcggcgcgaccgaacacccctttgcggaagggaatgtccctgttcccgatgaaaccgaa
aagaagatcgacgccctgactaggctgattagcaaagccgaggatcaggaaactgccatc
aagaagctcgaagaagctgaaaccctggcccgtaaaaacctgacggaggctgaaaagctg
gagtcagcagcggataatgacaagaaggccgccgagaaagccctcgccgaggtgaaggac
ggcctggtgaatcttcgggctgattttgccgaacgcagacaggctgttactaccaaactc
cagccgcttggtattgcggacatccctgaaaaggacatttcatcactgatcgaaactctc
agggagcagctgaaggcgtggcaggcccaggtcaagaaaaaggcggacatcgagaaacag
attgccgacatcgacagcgaggtgaagcggctgggtgcggttattgaaacccaaagcact
gccctggccgaaaagctggagcgtctggataccttgaaaaaggaactcgccgccggaaga
gatgagcgtaatgcactgtacggcgacaagaatcccgacaatgaggagcgccgtttaaac
aaggcgatttctgatgccgaaggtgccgaaaagcaggccagagaacggcacaatgagctc
caacaaaaatggaataccgcgaaggcccatgtcgaatctctgaagaaacgcatcgaccta
cgagagccggaactaaggggcctggaaaccgaattctccacagcgctcgcacctgtggga
ttttcaaatgaagaacagtttttggcggccatattgccatctgaagctcgggtggagttg
acagctacagccaaggatctggatgagcgccaaacagatctgaaagccagacagaaagat
cgggaaacacgcttggccaaggaacttgctcgtaaggtaaccgacaaatctctggaagag
ctcgaaccccaatttaaagaacaagaggatgccctgaaagagctgcgggacatcatcgcc
ggtctcaaacacaagctatgtgaaaataccgctgcaaaagagcggataaaggagaagcaa
acggctatcgaggcccagaaaaatgagtgcctgaggtgggaaaacctgcacgaattgatc
ggctccgcagacggtaagaagtaccggaattttgcccaggggctgaccttcgagatgatg
gttggtcatgccaaccgtcaactgcaaaaaatgacagaccgctacctgctggttcgtgat
gacgctcagcctctggaactcaacgtggtggacaactaccaggctggggagattcgatcc
acgaagaatctttcaggcggcgaaagttttattgtcagcctgtccctggcgctgggtttg
tcccatatggccagcaagaaagtccgggtcgattcactgttcctggatgaaggcttcgga
acactggacgaggaagccctcgacaccgctttggaaaccctcgcgggcctgcagcaggat
ggcaagctgatcggcgtcatttcacacgtacccgccttgaaggagcggatcagcacgcag
attcaggtaacgcctcaaaccggtggcagaagccagatatccggtcctggatgcggcagg
ctgagcgctacaggtcaggctttaacttga
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integrated database retrieval system
