Desulfuromonas sp. DDH964: DBW_0399
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Entry
DBW_0399 CDS
T04368
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBW_0399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_0399
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBW_0399
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DBW_0399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AMV70801
LinkDB
All DBs
Position
411577..413598
Genome browser
AA seq
673 aa
AA seq
DB search
MPPTADDLSMARFELTTTYQPRGDQPQAIAELVAGISRGDQHQVLLGVTGSGKTFTIANV
VAAVQRPTLVLAPNKTLAAQLYGEFKELFPHNAIEYFVSYYDYYQPEAYVPSTDTFIEKD
SSINEEIDKLRHSATRSLLSRRDVLIVASVSCIYGLGSPEAYFGMLVKLEEGEETDRNQL
LKRLVEIQYQRNDIDFHRGTFRVRGDTVEIFPAYEEDRAIRVEFFGDEIEAVSEIDPLRG
RVIDRIGRTTIFPASHYVATRPTLERAVKAIQDELQLRIQEFRANNMLLEAQRIEQRTLF
DIEMMEEMGYCQGIENYSRFLDGRQPGEPPATLFDYFPEDALLIIDESHVSVSQVGAMYR
GDRSRKETLVNFGFRLPSALDNRPLTFAEFEAKRLQTVYVSATPADYELKAASGVVVEQI
IRPTGLVDPPIEVRPAREQVDDLIHEIRATVAEGYRVLVTTLTKRMAEDLTGYLDELQIR
VRYLHSDIDTIERMEILRDLRQGGFDVLVGINLLREGLDLPEVALVAILDADKEGFLRSE
RSLIQTCGRAARNVDGRVIMYGDRVTRSMQACLDETERRRAVQLAYNAEHGITPESVKKS
LRTILEDIAERGDYGELPQVAEELEEFRSRDELQSEIERLRQEMLAAAAALEFETAAQLR
DRLLALEKRELGL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgacggcagacgatctgagcatggcccgctttgaactgacaaccacctaccag
ccccgtggcgaccagccgcaggcgatcgccgaactggtcgccggcatcagccgcggcgac
cagcaccaggtgctgctcggcgtcaccggctcgggcaagaccttcaccatcgccaacgtc
gtcgccgcggtacagcgcccgaccctggtcctcgcgccgaacaagaccctcgccgcccag
ctctatggcgagttcaaggaactctttccgcacaacgccatcgagtacttcgtctcctac
tacgactactaccagcccgaagcctacgtcccgtcgaccgacaccttcatcgaaaaggat
tcctcgatcaacgaggagatcgacaagctgcgccacagcgccacccgctcgctgctgtcg
cggcgcgacgtgctgatcgtcgcctcggtctcctgcatctacggtctcggttcgccggag
gcctacttcggcatgctggtcaagctcgaggagggggaggagacggatcgcaaccagctg
ctcaagcggctggtcgagattcagtatcagcgcaacgacatcgacttccaccgcggcacc
ttccgcgtgcgcggcgacaccgtcgagatctttccggcctacgaggaggaccgggcgatc
cgggtcgagttcttcggcgacgagatcgaggcggtaagcgaaatcgatccgctgcgcggc
cgggtaatcgaccgcatcggccgcaccacgatctttcccgccagccattacgtggcgacc
cggccgacgttggagcgggcggtcaaggcgatccaggacgagctgcagctgcgcatccag
gagttccgcgccaacaacatgctcctcgaggcgcagcgcatcgagcagcggaccctcttc
gatatcgagatgatggaggagatggggtactgccaggggatcgagaactactcgcgcttc
ctcgacggccgccaaccgggcgaaccgccggcgaccctttttgactacttccccgaggat
gcgctgctgatcatcgacgagagccacgtcagcgtctcccaggtcggcgccatgtaccgc
ggcgaccgctcgcgcaaggagaccttggtcaacttcggcttccgcctcccctcggccctc
gacaaccggccgctgacctttgccgagttcgaggcgaagcggctgcagaccgtctacgtt
tcggcgactccggccgactacgagctgaaggcggcctccggggtggtggtcgagcagatc
atccgccccaccggcctggtcgacccgccgatcgaggtacgcccggcccgggaacaggtc
gacgacctgatccacgaaatccgcgccaccgtcgccgagggctaccgggtgctcgtcacc
accctcaccaagcggatggccgaggaccttaccggctacctcgacgagctgcagatccgg
gtgcgctatctccactcggatatcgacaccatcgagcgcatggagattctgcgcgatctg
cgccaggggggcttcgacgtgctggtcgggatcaacctgctgcgcgaggggctcgacctg
ccggaggtggcgctggtggcgatcctcgacgccgacaaggagggattcctgcgcagcgag
cgctccctgatccagacctgcggccgggcggcacgcaacgtcgacggccgggtgatcatg
tacggcgaccgggtgacgcgctcgatgcaggcctgcctcgacgagaccgaacgccggcgc
gccgtccagcttgcctacaacgccgagcacggcatcaccccggagtcggtcaagaagagc
ctgcgcaccatccttgaggatattgccgagcgcggcgattacggcgagctgccgcaggtg
gccgaggaactggaggaatttcgcagccgggacgagctgcagtcagagattgagcgactg
cgccaggagatgctggcggccgccgccgccctcgagttcgaaacggcggcccagctgcgt
gaccggctgctggctttggagaagcgggagttggggctgtaa
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integrated database retrieval system
