Desulfuromonas sp. DDH964: DBW_0865
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Entry
DBW_0865 CDS
T04368
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBW_0865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deu03019
]
DBW_0865
Enzymes [BR:
deu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DBW_0865
Messenger RNA biogenesis [BR:
deu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBW_0865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMV71247
UniProt:
A0A143B471
LinkDB
All DBs
Position
959172..960455
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AA seq
427 aa
AA seq
DB search
MNFSSFQFHPKVAAGIAAAGFTTPTPIQAQAIPRVMAGRDIMGLAQTGTGKTAAFGLPIL
HRLLQGERGHVRALVIAPTRELAEQIHVAISAFGSETGLRSATIYGGVGINPQVQKLKRG
VEIVVACPGRLLDHIRQQTIDLSRVEVLVLDEADQMFDMGFFPDIRKILGHLPRQRQNLL
FSATMPVAIRKLAAEVLTAPETIQVDTLAPATTVSHAIYPVAQHLKTDLLLELLRHTDTG
SVLIFTRTKHRAKRLDEKLCKSGFKAASLQGNLSQSRRQAALDGFRDGRFQILVATDIAA
RGIDVSQISHVINYDIPATTEAYIHRIGRTGRAACSGDAFTLVSSEDRAMVQSIERVLGS
AIERRTLAAFDYNQAAPERPKTAAGAPRQPRPEAARRSKSPASPARSPRRGPRQGGAVAS
RNSARNS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcagcagtttccagttccaccccaaggttgcggccggcattgccgctgccggc
ttcaccacccccacgccgatccaggcccaggccatcccccgggtcatggccggtcgcgac
atcatgggcctggcccagaccggaaccggcaagaccgcggccttcgggctgccgatcctg
caccgcttgttgcagggggagcgcggtcatgtgcgcgccctggtcatcgccccgacccgc
gagctggccgagcagatccacgtggcgatttccgctttcggcagcgagaccggtctgcgc
agcgccaccatctacggcggcgtcggcatcaatccgcaggtccagaagctgaagcgcggc
gtcgagatcgtcgtcgcctgcccggggcgcctgctcgaccatatccggcaacagaccatt
gacctctcccgcgtcgaggtgctggttcttgacgaggccgaccagatgttcgacatggga
ttctttcccgacatccggaagatcctcgggcatctgccgcggcagcgccagaacctcctc
ttctcggcgaccatgccggtagcgatccgcaagctcgcagccgaggtcctgaccgcgccg
gagacgatccaggtcgataccctggcgccggcgacgaccgtcagccatgccatctacccg
gtcgcccagcacctcaagaccgacctgctgctcgaactgctgcggcataccgataccggc
tcggtcctgatcttcacccggaccaagcaccgcgccaagcggctggacgaaaagctctgc
aagagcggcttcaaggccgcctcgctgcaggggaacctctcccagtcgcggcgccaggcg
gcccttgacgggttccgcgatggccgtttccagatcctcgtcgccaccgacatcgccgcc
cgcggcatcgatgtctcgcagatttcccatgtcatcaattacgacatcccggcgaccacc
gaggcctatatccatcggatcggccgcaccggccgcgccgcctgcagtggcgatgccttt
accctggtgagcagcgaagaccgggcgatggtgcaatcgatcgagcgggtcctcggcagt
gccatcgagcggcgcaccctggccgctttcgattacaaccaggccgctcccgagcggccc
aaaacggcagccggcgcaccccgtcagccgcggcccgaggcggcccggcgcagcaagtct
ccggcctcccccgcgcgctcgccgcggcgtggaccccgccagggcggggctgtcgcctcc
cgcaactccgcccgcaatagctga
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