KEGG   Desulfuromonas sp. DDH964: DBW_1204
Entry
DBW_1204          CDS       T04368                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
deu  Desulfuromonas sp. DDH964
Pathway
deu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:deu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DBW_1204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:deu03019]
    DBW_1204
Enzymes [BR:deu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DBW_1204
Messenger RNA biogenesis [BR:deu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DBW_1204
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_11 ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AMV71578
UniProt: A0A143B5G6
LinkDB
Position
1296420..1297691
AA seq 423 aa
MKFTELNLPAEVLKGVAAVGFTELTPVQEESIPLALAGKDVAAQAQTGTGKTAAFLISLF
TRLLRSDRGSGRDPRALVLAPTRELVMQICEDAKGLGVGCPFRVEAIFGGVDYDKQRQAL
KDGVDIIVATPGRLIDYAKQRVFSFNSIEAVVIDEADRMFDMGFIKDLRYILRKLPPFEE
RQTMLFSATLSPRVMELAYEFMDLAEKVRIEPEKITADRVEQVLYHVGRREKFPLLLGLL
RKEPQPQRILLFVNTKREGEHLAERLKANDFKAAVISGDIPQRKRMRILEDFKESRLNFL
VATDVASRGIHVDDVTHVVNYDLPQDADDYVHRIGRTARAGAAGKAISFADEDLVFHLPD
IEEYIGRKIPSTFPEEEDFVRDYKRSAPTHRKAPVPEKQAGHGHGDKRPRRRGPKRRGGK
GPN
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaaattcaccgaactgaatctgcccgccgaggtcctgaagggagtcgcggcggtcggc
ttcaccgagcttaccccggtccaggaggagtcgatccccctcgctctcgccggcaaggat
gtcgccgcccaggcgcagacggggaccggcaagaccgcggcctttttgatctccctcttt
acccgcctgctgcgcagtgaccggggtagcggccgcgacccccgggcgctggtgctcgcc
ccgacccgggaactggtgatgcagatctgcgaggacgccaaggggctcggggtcggctgc
cccttccgcgtcgaggcgatctttggcggggtcgattacgacaagcagcgccaggcgctc
aaggacggcgtcgacatcatcgtcgcgaccccgggccggctgatcgactacgccaagcag
cgggtcttctccttcaacagcatcgaggcggtggtcatcgacgaggccgaccgcatgttc
gacatggggttcatcaaggacctgcgttatatcctgcgcaagctccccccttttgaagag
cggcagacgatgctcttttcggcgaccctctcgccgcgggtgatggagctcgcctacgag
ttcatggacctggccgagaaggtgcggatcgagccggagaagatcaccgccgaccgggtc
gaacaggttctctaccacgttggccggcgcgagaagttcccgctcctgctcggcctgctc
cgcaaagagccgcaaccgcagcgaatcctcctcttcgtcaacaccaagcgcgagggggag
catctcgccgagcgcctcaaggcgaacgatttcaaggccgcggtgatttccggcgacatc
ccgcagcgcaagcggatgcgcatcctcgaggatttcaaggagagccggctcaacttcctc
gttgccaccgatgtcgcttcccgggggattcatgtcgatgacgtgacccatgtcgtcaat
tatgacctgccccaggatgccgacgactacgtccaccgtatcggccgtaccgcccgggcc
ggtgccgctggcaaggcgatcagctttgccgacgaggatctcgtcttccacctccccgac
atcgaggagtatatcggccgcaagatcccgagcacctttccggaggaggaggacttcgtc
cgggattacaagcggagcgcgccgacccatcgcaaggcgccggtgccggaaaagcaggcc
ggtcatggtcacggcgacaagcgcccgcgccggcgcggaccgaaacgccgtggcggcaag
ggcccgaattga

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