Desulfuromonas sp. DDH964: DBW_1610
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Entry
DBW_1610 CDS
T04368
Name
(GenBank) 3'-to-5' exonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
deu
Desulfuromonas sp. DDH964
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deu03019
]
DBW_1610
Messenger RNA biogenesis [BR:
deu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DBW_1610
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AMV71972
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All DBs
Position
1735956..1737068
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AA seq
370 aa
AA seq
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MKKIFVEQIRERDWVESPFLVRDKIMAMAKNGKPYMTLKLIDRSGEVEGRVWDRVDELAE
LFERDDFLLVKGKASVYMGKMQLVIQELERLPENNIDLADFLPVAPRDAGEMLQELRTRV
ASLSDPHLRGLLEDFLADPLFLQRYTTAPAAKAMHHVYIGGLLEHSLAVAALADDVCRRY
PGINHDLLVAGALLHDVGKVAELSYVRSFDYTDDGKLLGHIVIGVEMIEERLRRLPDFPR
PLATLLKHLLLSHHGQYEYGSPKRPKTLEAVILNFIDDLDSKINGVRTHIEREPDSESSW
TSYHRLYDRYFFKGSEAPRKRVATAPVPPAKPAPPAAAPAENRPRFGTTLGEQLKGKSLD
LFATPDTEKE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagatattcgtcgagcagattcgtgagcgggactgggtggagagcccgtttctg
gtgcgcgacaagatcatggccatggccaagaatggcaaaccctacatgaccctcaagctg
atcgaccgcagcggcgaggtcgaagggcgggtctgggaccgggtcgacgagctggcggag
ctcttcgaacgggacgattttcttctggtcaaggggaaggcgagcgtctacatggggaag
atgcagctcgtgatccaggaacttgagcggctgccggagaacaatatcgacctcgccgac
tttctcccggtcgccccccgcgatgccggggagatgctgcaggagctgcgcacccgcgtc
gcctccttaagcgacccccacctgcgcggcctgctcgaggattttctcgctgatcccctt
tttctgcagcgctataccacggcaccggccgccaaggcgatgcaccatgtctatatcggc
gggctgctcgaacattccctggcggtggccgcgctcgccgacgatgtctgtcgccgctac
cccggcattaaccacgatctgctggtggccggcgcactgctccatgatgtcggcaaggtc
gccgagctgagctacgtgcgcagcttcgactataccgatgacggcaagcttctcggtcat
attgtcatcggtgtcgaaatgatcgaggaacggctgcgccggctccccgattttccgcgg
cccctggcgacgctcctcaagcacctcctcctctcccatcacggccagtacgagtacggg
tcgccaaaacggcccaagaccctcgaagcggtaattctcaactttatcgatgacctcgac
tcgaagatcaacggggtgcgcacccatatcgaacgcgaaccggatagtgaatcgtcctgg
accagttaccaccgcctctatgatcgctacttcttcaaggggagtgaggccccgcgcaag
cgtgtcgccaccgccccggtcccaccggccaaaccggctccgccggccgctgcaccggcg
gagaacaggccccgcttcggaaccaccctgggcgagcagctcaaggggaaaagcctcgac
ctctttgccactcccgatacggagaaggagtaa
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