Desulfuromonas sp. DDH964: DBW_2169
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Entry
DBW_2169 CDS
T04368
Name
(GenBank) single-stranded DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03410
Base excision repair
deu03430
Mismatch repair
deu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DBW_2169
03430 Mismatch repair
DBW_2169
03440 Homologous recombination
DBW_2169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_2169
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DBW_2169
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DBW_2169
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DBW_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMV72510
UniProt:
A0A143B7X5
LinkDB
All DBs
Position
complement(2306392..2308122)
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AA seq
576 aa
AA seq
DB search
MEPVTERRWRQRGTEADAPSLTRLCRDLGVGPLTARVLHGRGFTDGDSARAFLAAGLRDL
PDPTALGGMATAVARLVRAICGGERILVHGDYDVDGITGTALLVENLRSFGAEVLSHIPL
RLRDGYGLSAAALKEAAAQGVTVVLSVDCGVSAVTEARIARELGLDLIITDHHQPPDPLP
VAHAIVNPQLPGETFPGQQLAGVGVAFFLLVALRQALREMGHFSIRPEPDLRYGLDLVAL
GTIADLVPLTGINRILVRAGLPLLEQNRRPGVRDLREVAGVRRVTAGSVGFQLAPRLNAA
GRLEDAGRGVDLLLDREGRETKALASQLDRFNQERRRLEEETLQQAIAALESVADQADQS
IVLADERWHPGVIGIVASRLVERYHRPTVLIALEGEQGKGSARSIRGFHLYQALAACREH
LEGFGGHEFAAGLSLAGSSLELFRRAFEAQARQRLVAENLIPEVLFDGELLLAELDAAAV
EDLERLAPFGMGNAEPAFVLRDISARQVRLLGEEHLRFTAQQDGYSLPCVAWRLAGQRQL
LDAPVDLLVHPEFNEWQGRRQLQLRVRDVRPALGTD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggagccggtaaccgagcgccgctggcgccagcgcgggacggaagcggacgctccgtcc
ctcacccgcctctgtcgcgaccttggtgttggccccctgactgcgcgggttctgcacggg
cgcggtttcaccgacggcgattcggcccgggcctttctcgccgccgggctgcgtgacctc
cccgacccgacagcccttggcgggatggcaacggcggtggcgcgcctggtccgtgccatt
tgcggtggagaacgcatcctggtccatggcgactacgatgtcgacggcatcactggcact
gcgctgctggtggagaacctgcggagtttcggcgccgaggtcctctcccacatccctctg
cgtctgcgcgacggctacggcctgtccgctgccgccctcaaggaagcggctgcccagggg
gtaacggtggtcctctccgtcgactgcggggtctccgccgttaccgaagcccgcatcgct
cgtgagctgggcctcgacctgatcatcaccgaccatcaccagcctcccgacccgctcccc
gtcgcccacgccattgtcaatccgcagctccccggtgagacctttcccggccaacagctc
gccggcgtcggcgtcgcctttttcctgctggtcgccctgcgccaggcactgcgcgaaatg
ggtcacttttcaatccgcccggaacccgacctgcgctatggactcgatctggtcgctctg
gggacgattgccgacctcgtccccctgaccggaatcaaccgcatcctggtcagggccggg
ctccccctgctcgaacagaatcggcgcccgggggtcagggacctgcgcgaagtcgccggg
gtgcgtcgggtgacggccggcagcgtcggcttccaactcgccccgcgcctcaatgccgcc
ggtcgccttgaggatgccggccgcggcgtcgacctcctgctcgaccgggaagggcgcgag
accaaggcgctggccagccagcttgaccgtttcaaccaggaacggaggcggcttgaggag
gagaccctgcaacaggcgattgccgcgctcgaatcggttgcggaccaggccgaccagagt
attgtcctggccgacgagcgctggcatccgggggtcatcggcatcgtcgcgagccgcctg
gtcgagcgctaccaccggccgacggtcctgatcgcgctggaaggggagcaggggaaggga
tcggcgcgctcgatccgcggttttcacctctaccaggccctggcggcctgccgggaacac
ctggaggggttcggagggcatgagttcgcggccggtctgagcctggcgggatcttctctg
gagcttttccgccgcgccttcgaagcgcaggcgcggcaacgcctggttgcggaaaacctg
attcccgaggttctcttcgacggggagcttctgctcgcggagctcgatgccgccgccgtc
gaggacctggagcggctcgcccctttcgggatggggaatgcggagccggctttcgtcctg
cgcgacatatccgcccggcaggttcgcctgctcggcgaggagcacctcaggtttactgcc
cagcaggatggctatagcctcccctgcgtggcctggcgtctggccggacagcggcagctg
ctcgatgccccggtcgaccttctggttcatccggaattcaacgagtggcaggggcgaaga
cagttgcaattgcgggtacgggatgtgcgaccggcgctggggacggattga
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