Desulfuromonas sp. DDH964: DBW_2228
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Entry
DBW_2228 CDS
T04368
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu02020
Two-component system
deu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DBW_2228
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DBW_2228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
deu03021
]
DBW_2228
Transcription machinery [BR:
deu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DBW_2228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MutS_III
Motif
Other DBs
NCBI-ProteinID:
AMV72568
LinkDB
All DBs
Position
complement(2367947..2369398)
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AA seq
483 aa
AA seq
DB search
MALEIRQQLKLSQQLVMTPQLQQAIKLLQLSRMELVELVQQELEENPVLEEGAEEVQEAE
TAAAEAERTDESASASEEVKEVAGGDEGLNDIDWQTYLEGYNLGGTVADSYEEDEDRPSY
ENLLTKKSTLSDHLLWQLGLSRISGLQRLVATEIIGNIDDDGYLTATPEEIAGACGCTSG
EVETVLGQVQAFDPPGVAARSLQECLLLQVRQLDMVGTLVETILRDFIGELENRKFQAIA
KAVGATLDEVLGAAKVISQLDPKPGTPFGHDDVHYIIPDIFVYKIGEEYVVVLNDEGLPN
LRINSFYRHALSGASSIDAKAGEYIQEKMRGAVWLIKSIHQRQRTIYKVTRSIVKFQRDF
FDRGIEHLRPLVLRDVAEDIEMHESTISRVTTNKYVQTPQGLFELKYFFNSGINTTEGES
VASESVKSKIRDIVAGENPKKPYSDQKIVDILKRHGIDIARRTVTKYREMLGIGSSTERK
RLF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgaaatccgacaacaactgaaactgagccagcaactggtgatgactccccag
ctgcagcaggcgatcaagcttttgcagttgtcacgcatggagctggtcgaactggtgcag
caggaactggaggagaatcccgtcctggaagaaggcgccgaggaagtccaggaagcagaa
accgccgcggccgaggccgagaggacggatgagtccgcatccgcttccgaggaagttaag
gaagttgccggtggcgacgaggggttgaatgatatcgactggcagacctacctcgaaggc
tacaaccttggcggtacggtggccgactcctacgaagaagacgaagatcgcccctcctat
gaaaacctgctgaccaagaagagcaccctttccgatcacctcctctggcagttgggactg
tcgcgaatatccgggttgcagcggctggtggctaccgagatcatcggcaacatcgatgac
gacggctacctgaccgctacacccgaagaaatcgccggggcctgcggctgtaccagcggg
gaggtcgagaccgtcctgggccaggttcaggccttcgacccgcccggggtggccgcgcga
agcctgcaggagtgcctgctgttgcaggtccggcaactggacatggtcggcaccctggtc
gagaccattctgcgggattttatcggtgaactcgaaaaccggaaattccaggcgattgcc
aaggcggtcggggcgactctcgacgaggttctgggcgcggccaaggtgatcagccaactc
gatcccaagccgggtactcctttcggccatgacgatgtccactatatcattccggatatc
ttcgtctacaagatcggcgaggagtatgtcgtcgtgctcaatgacgaaggactgccgaac
ctgcggatcaactccttctatcgccatgccctctccggcgcttcgagcatcgatgccaag
gccggggaatacatccaggagaagatgcgcggcgcggtctggctgatcaagagtatccat
cagcgccagcggaccatctacaaggtcacccgcagcatcgtcaagttccagcgggatttc
ttcgatcgggggatcgagcacctccgccccctggttctgcgcgatgtcgccgaagacatc
gagatgcacgaatcgacgatcagtcgggtgaccaccaacaagtatgtccagaccccgcag
gggctcttcgaactcaagtatttcttcaacagcggcatcaacaccaccgaaggtgagtcg
gtggcgtcggagagcgtgaagagcaagattcgggatatcgttgcgggagagaaccccaag
aagccctattcggaccagaagattgtagacatactcaagcgccatggcatcgatatcgcg
cgcaggaccgtcaccaaataccgtgaaatgcttgggatcggttcttccacggaacgcaaa
aggctcttctag
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