Desulfuromonas sp. DDH964: DBW_2617
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Entry
DBW_2617 CDS
T04368
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBW_2617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deu03019
]
DBW_2617
03009 Ribosome biogenesis [BR:
deu03009
]
DBW_2617
Enzymes [BR:
deu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DBW_2617
Messenger RNA biogenesis [BR:
deu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DBW_2617
Ribosome biogenesis [BR:
deu03009
]
Prokaryotic type
rRNA helicases
DBW_2617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMV72944
UniProt:
A0A143B9T2
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All DBs
Position
complement(2767702..2769447)
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AA seq
581 aa
AA seq
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MSEEKTITFAELNLAPAIFKVIDEVGYEVPSPIQAQSIPPLLAGRDLLGQAQTGTGKTAA
FSLPLLSRLDPKLRYPQILVLTPTRELALQVAEAMQTYARHLDGFQVLPVYGGQNMLAQL
RQLQRGVQAVVGTPGRIQDHLRRGTLQLDRLACVVIDEADEMLKMGFIDDVEEILKHTPA
AKQTALFSATMPKEVLQVARRHMKDPVEIRIKSKTSTVETISQWYWQVKGLHKLDALTRI
LEAEEFDAMLIFARTRIETVELAEKLEARGFSCAPLNGDMTQALREKTIERLKNGALDIV
IATDVAARGLDVKRISHVVNYDIPYDTEAYVHRIGRTGRAGREGKAILFVAPRERRMLYA
IEQATRQPIKPMSLPSRQDITDRRIGLFKEQIAEALESQDLEFFEELIDGYQDEYDVGFR
RIAAALAYLVQKEKPLQHEGPADPPAIEDREFSRAPAPRGERVAPRGGPSQRYRIEVGRS
HGVEPRHIVGAITNEAQLSSADIGAIRLFHDFSLVDLPADLPPQVIRLLQGVWVCGQQLK
LSVDAGPAAARSEQASGRRPYVKPGGDRPGGKKPPFKKRGK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagaagaccatcacctttgccgaactgaacctcgcacccgctatcttcaag
gtcatcgacgaagtcggttacgaagtcccctcgccgatccaggcgcagagcattccgccg
ctgctggcggggcgcgacctcctcggccaggcgcagaccggcaccggcaagaccgccgcc
ttctccctgccgctcctctcccgcctcgacccgaagctgcgctacccgcagatcctggtt
ctcaccccgacccgcgagctcgcactgcaggtcgccgaggcgatgcagacctacgcccgc
catctcgacggattccaggtgctgccggtctacggcggccagaacatgctcgcccagttg
cgccagctgcagcggggcgtgcaggcggtggtcggcaccccggggcggatccaggaccac
ctgcgccgcggcaccctgcagctcgaccgtctcgcctgtgtcgtcatcgacgaggccgac
gagatgctgaagatgggtttcatcgacgatgtcgaggagatcctcaagcacaccccggcc
gcgaaacagaccgccctcttttcggcgaccatgccgaaagaggtgctgcaggtcgcccgg
cggcacatgaaggacccggtcgagatccgcatcaagagcaagacctcgaccgtcgagacg
atctcccagtggtactggcaggtcaaggggctgcacaagctcgatgccctgacccgcatc
ctcgaggccgaggaattcgacgccatgctgatcttcgcccgcaccaggatcgagaccgtg
gaactggcggaaaagctcgaggcgcgcggcttttcctgcgcccccctgaatggcgacatg
acccaggccttgcgggagaagaccatcgagcgcctcaagaacggcgccctcgatatcgtc
atcgccaccgacgtcgccgcccgcggcctcgacgtcaaacgcatcagccatgtcgtcaac
tacgacattccctacgacaccgaggcctacgtccaccgcatcggccgcaccggccgcgcc
ggccgggaagggaaggcgatcctctttgtcgccccgcgcgagcggcgcatgctctacgcc
atcgagcaggcgacccgccagccgatcaagccgatgagcctgccgagtcgccaggacatc
accgatcggcgtatcggcctgttcaaggagcagatcgccgaggcgctcgaaagccaggat
ctcgagttcttcgaagagctgatcgacggctatcaggacgagtatgacgtcggcttccgc
cgcatcgctgccgccctggcctacctggtgcagaaggagaagccgctgcagcatgagggg
cctgccgacccgccagccatcgaggatcgggaattttctcgggcgccggcgccccgcggg
gagcgggtcgccccccgcggcggtccgtcgcagcgctaccgcatcgaggtcggccgcagc
cacggtgtcgagccgcgccacatcgtcggcgccatcaccaacgaggcccagctcagcagc
gccgacatcggcgccatccggctcttccacgacttcagcctggtcgatctgcccgccgac
ctgccgccgcaggtcatccgcctgctgcagggggtctgggtctgcggccagcagttaaag
ctcagtgtcgatgccggccccgccgcggcgcggtcggaacaggcatccggcaggcgccct
tacgtcaagccgggtggggaccggcccggcggcaaaaagccgccgttcaagaagcgcggc
aagtga
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