Desulfuromonas sp. DDH964: DBW_2993
Help
Entry
DBW_2993 CDS
T04368
Name
(GenBank) 3'-to-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03030
DNA replication
deu03430
Mismatch repair
deu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBW_2993
03430 Mismatch repair
DBW_2993
03440 Homologous recombination
DBW_2993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deu03032
]
DBW_2993
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_2993
Enzymes [BR:
deu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBW_2993
DNA replication proteins [BR:
deu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBW_2993
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBW_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
PAS_8
DEDDh_C
PAS
HAMP
Peripla_BP_2
DUF996
Motif
Other DBs
NCBI-ProteinID:
AMV73302
LinkDB
All DBs
Position
3172988..3174532
Genome browser
AA seq
514 aa
AA seq
DB search
MTLNPALKYWIFLAGIVAAIFTVILGSFTVSWYSLDNAEKALVQELAGKLLPFPFLGAIL
LVVIIGTLISLLFSYYIIPILQLAEQARLITTVNLSYRIPPEGAREIRYLSSVLNDSADA
FQRLQQEVDGRIAAAQAALQEEHNRLAALMSELPSGVLVCNSAGQILLYNQQAQNLLQRK
SGMGNLAGAWIGLGRSIFGALERGPIAAGLEAHQLAAREGHQLPATTFPTTLPDGTALRV
KLAPVFHPGAARTKLDSFVLTLEELDRNRAADDLAAPPPVLPASSPAPALQANVEARPVF
YEFDLFRQPPGEEVGQQSLRDVTYVVFDTETTGLDPSAGDEVIQLGAIRVVKGRLLLDET
IDQLIDPQRSVPASSVAIHGIAPELLIGQPTIEEILPLFKTFAEGAVLVAHNAAFDMRFL
NLHQTRTGIVFRQPVLDTLLLSSIVHPTLGSHSLDAIAERFDIPIVGRHTALGDAIVTAE
VLLKLIPLLEAIGIRTLGEALAAEARSPYARIQT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgaacccggccctgaaatactggatcttcctcgccggcatcgtcgccgccatc
ttcaccgtgatcctcggcagcttcaccgtctcctggtacagtctcgacaacgccgagaaa
gccctggtccaggaactcgccggcaaactgctccccttcccctttctcggcgccatcctc
ctcgtcgtcatcatcggcaccctgatcagcctcctcttcagctactacattattccgatc
ctgcaactcgccgagcaggcccggctgatcaccaccgtcaacctcagctaccgcattccg
ccggaaggcgcccgcgaaatccgttacttgagttcggtcctcaacgattcggccgacgcc
ttccagcgcctgcagcaggaagtcgacgggcggattgcggctgcccaggccgcgctgcag
gaggaacataaccgcctcgccgccctgatgtccgagctgccgagcggggtgctggtctgc
aacagcgccggccagattctcctctacaaccagcaggcgcagaacctgctgcagcgcaaa
tcggggatgggaaacctcgccggcgcctggatcggcctcggtcgctccattttcggtgct
ctcgagcgcggaccgattgccgccggcctcgaagcccatcagctcgcagcgcgggaaggc
caccagctgccggccacgacctttccgaccaccctccccgacggcaccgcgctgcgcgtc
aaactggcgccggtcttccatcccggcgcagcacgaaccaaactcgacagctttgtcctc
accctggaagagctggaccgcaacagagcggccgatgacctcgcagcgccgccgccggtc
ctgcctgccagcagcccggcaccggcgctgcaagccaatgtcgaagcccgcccggtcttc
tatgaattcgacctctttcgtcagccgcccggagaggaagtcgggcagcagtcgctgcgg
gatgtgacctatgttgtcttcgacaccgagacgaccggccttgatccgagcgccggggac
gaagtgatccagctcggcgccatccgggtcgtcaagggacggctcctcctcgacgagacc
atcgaccagctcatcgatccccagcgctcggtgccggccagctcggtagcgatccacggc
atcgccccggaactgctgatcggccagccgaccatcgaggagatcctgcccctcttcaag
acctttgccgagggggcggtcctggtcgcccacaacgccgcctttgacatgcgcttcctc
aacctccatcagacccgcaccggcatcgtctttaggcagccggtcctcgacaccctgctc
ctctcctccattgtccacccgaccctggggagccactccctcgacgccattgccgagcgc
ttcgacattcccatcgtcggccgccacactgcgctgggcgatgccatcgtcaccgccgag
gtcctgctcaagctgatccccctcctcgaagcgatcggcatccgcacccttggagaggcc
ctcgccgccgaggcccgctccccctatgcccgcatccagacctga
DBGET
integrated database retrieval system
