Desulfuromonas sp. DDH964: DBW_3200
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Entry
DBW_3200 CDS
T04368
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
deu
Desulfuromonas sp. DDH964
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deu03032
]
DBW_3200
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_3200
Enzymes [BR:
deu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DBW_3200
DNA replication proteins [BR:
deu03032
]
Prokaryotic type
DNA Topoisomerases
DBW_3200
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DBW_3200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMV73507
UniProt:
A0A143BAQ7
LinkDB
All DBs
Position
3406881..3409223
Genome browser
AA seq
780 aa
AA seq
DB search
MAKSLVIVESPAKAKTIEKFLGKGFKVLASYGHVRALPSKQGMVDIANGFEPNYQILPES
SKQIALLRKELQGADELILATDPDREGEAIAWHLLQALGIDEKGAKPRVRRVTFHEITAK
AIQAAMAAPGQIARDLVDAQQARSILDYLVGFNLSPFLWKKIRYGLSAGRVQSVALRLIC
DREKEIEAFVTEEFWTLDALLANQAATLFKARLFAIDGKKLDKFAIANQAQADALVSALA
GQPFQVASVNRSEKKRNPAPPFTTSTLQQEASRKLGFSARKTMSTAQKLYEGIDIGQGSV
GLITYMRTDSVTLSTDATDEARQVITAVYGKDYALAKPRVYKSKAKNAQEAHEAIRPTTI
ANTPDQVKPFLSSDQYRLYKLIWMRTVASQMAAAILDASSVDLAAGDRYTFRATGQVVRF
PGFMKLYIEGTDDAVEEQEGTLPLLTVGEELACRELNPEQHFTQPPPRFTEASLVKTLEE
YGIGRPSTYASIMNTLVTRKYVRLEKRTFYPEDIGRVVNDLLTSHFAKYVDYDFTAQLEE
DLDAIARGEEQWRPLLKGFWEPFIALLKQKEQEVRKEDLTTEKTDRDCPECGKPLVVKLG
RSGKFLACSGFPECRHTEPLAAEEREEPVLSEEKCDKCGAPMLIKEGRFGKFLACSAYPA
CKNIQPLVKPKALGVACPECKEGELMEKKSRYGKIFYSCNRYPKCKYALWDPPVAEPCPK
CSWPVLVDKTTKRDGTVRKCPQEGCDYKLVLVPPDKPAAAAKEKPKSKAASKKKPAKKTK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggtcatcgtcgaatcaccggccaaggccaagaccatagaaaagttt
ctcggcaaggggttcaaggtgctcgcctcctacggccacgtccgggcgttgccgagcaaa
caggggatggtcgacatcgccaacggcttcgaaccgaactaccagatcctgcccgagagc
agcaagcagatcgcgctgctgcgcaaggaactccagggggctgacgagctgatcctcgcc
accgaccccgaccgcgagggagaagcgatcgcctggcacctgctgcaggcgctggggatc
gatgagaagggcgccaagcccagggtacgccgggtcaccttccacgagattaccgccaag
gcgattcaggcggcgatggcggcgccgggacagatcgcccgcgacctggtcgacgcccag
caggcccgttcgattctcgattatctggtcggcttcaacctctcccccttcctctggaag
aagatccgctacggtctctcggccggccgcgtccagtcggtggcgctgcgtctgatctgc
gaccgggaaaaagagattgaagccttcgtcaccgaggaattctggaccctcgacgccctg
ctcgccaatcaggccgccaccctcttcaaggcgcggctctttgccatcgacggcaagaaa
ctcgacaagtttgctatcgccaaccaggcccaggccgacgcactggtcagtgccctcgcc
gggcagccgttccaggttgccagcgtcaaccgcagcgaaaagaagcgcaaccccgcgccc
cccttcaccaccagcaccctgcagcaggaggcgagccgcaagctcggcttctcggcccgc
aagaccatgagcacggcgcagaaactctacgaggggatcgacatcggccagggctccgtc
ggcctgatcacctatatgcgaaccgactcggtgaccctgtcgacggacgccaccgacgag
gcccgccaggtcatcaccgcggtctacggcaaggactacgcgctggccaaaccgcgggtt
tacaagagcaaggcgaagaatgcccaggaggcccatgaggcgatccggccaacgaccatc
gccaacaccccggaccaggtcaagccgttcctctcctccgaccagtatcgcctctacaag
ctgatctggatgcgcaccgtcgcctcgcagatggcagcggcgatcctcgacgcctccagc
gtcgaccttgctgccggcgaccgctacaccttccgcgccactggccaggtggtgcgcttc
cccggcttcatgaagctttacatcgaggggaccgatgatgccgtcgaagagcaggaaggc
accctgccgctgctcaccgtcggggaggagctcgcctgccgcgaactgaaccccgagcag
cacttcacccagccgccgccacggtttaccgaggcgagcctggtcaagaccctggaggag
tacgggatcggccgtccctcgacctacgcctcgatcatgaataccctggtcacccgcaaa
tacgtgcgcctcgagaaacggaccttctaccccgaagatatcggccgggtcgtcaacgat
ttgctgaccagccattttgccaagtacgtcgactacgatttcaccgcccaactggaagag
gacctcgatgccatcgcccgcggcgaggaacagtggcgccccctgctcaaggggttctgg
gagcccttcatcgccctgctcaagcagaaagagcaggaggtgcgcaaggaagatctgacc
accgaaaagaccgaccgcgactgccccgaatgcggcaagccgctggtggtcaaactcggc
cgttccggcaagttcctcgcctgctccggtttccctgaatgccggcataccgagccgctc
gctgccgaagagcgggaagagccggtcctctccgaagagaagtgcgacaagtgcggcgcg
ccgatgctgatcaaggagggccgcttcggcaagttcctcgcctgcagcgcctatccggcc
tgcaagaacatccagccgctggtcaagcccaaggcccttggcgtcgcctgccctgaatgc
aaggaaggggagctgatggagaagaagagccgttacggcaagatcttctactcctgcaac
cgttaccccaagtgcaaatacgcgctctgggacccgccggtcgccgagccctgccccaaa
tgcagctggccggtgctggtcgacaagacgaccaagcgcgacggcaccgtgcgcaaatgc
ccccaggaaggctgtgactacaagctcgtgctggtgccaccggacaagccagctgccgcc
gcaaaggagaagccaaaaagcaaagcggccagcaaaaagaaaccggcaaaaaagaccaaa
tag
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