Desulfuromonas sp. DDH964: DBW_3644
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Entry
DBW_3644 CDS
T04368
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBW_3644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_3644
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBW_3644
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DBW_3644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
AAA_21
BCA_ABC_TP_C
nSTAND3
AAA_33
AAA_18
ATPase
Viral_helicase1
AAA_14
SLFN-g3_helicase
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AMV73941
UniProt:
A0A143BCQ9
LinkDB
All DBs
Position
complement(3887020..3889833)
Genome browser
AA seq
937 aa
AA seq
DB search
MTNKIIIKGACEHNLKCIDVEIPRDQLVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSA
YARQFLEQMDKPDVESIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGRVH
CHQCGKEIASQTVEQMVDHILAWPEKTRLLLLAPIVRGRKGEYRKELKQLQADGFVRVRI
DGEIYELAETPELDKKKQHTIEVVVDRLVLKEEVRTRLADSLETALRLAEGLVRVEVVGG
ESLVFSQQHACVDCGISYPEITPRMFSFNNPFGACPACAGLGTRMYFDPEQVVPNPALSL
REGAIAPWESRTGFYYQQLLEALADHYGFDINVPFAQLPEKLQTVLLHGSGKEEVRFYFD
QGGRRHFYHKVFEGVIPNLERRYHETDSENVRENLERFMNVMPCPTCEGARLKKESLFVR
IGGRSIREVTALSIVEAERYFSELELTAKEQEIARRILKEVRERLSFLTHVGLDYLTLDR
TAGTLSGGEGQRIRLATQVGSSLVGVLYILDEPSIGLHQRDNRRLLDTLKRLRDLGNTVL
VVEHDEETILEADHVIDMGPAAGVHGGEVVAQGTPQEILADPRSLTGRYLSGELSIPVPA
GRRKSERSLTIRGARENNLKGVDVAIPLGVMTCVTGVSGSGKSTLILDTLYKALAQRLYR
AKEKAGKVDDILGLEYLDKVIDIDQSPIGRTPRSNPATYTGVFTDIRDLFAQLPEAKIRG
YKPGRFSFNVKGGRCEACQGDGIIKIEMHFLPDIYVQCEVCKGARYNRETLEVRYKGTNI
AELLDMTANQAAKFLENIPRIRNKLETLRDVGLGYIKLGQSATTLSGGEAQRVKLAKELG
KRATGRTIYILDEPTTGLHFADIQKLLDVLQRLVESGNTVVIIEHNLDVIKTADHLIDLG
PEGGSRGGEVVAVGTPEEVARSSRSHTGRYLRAYLDL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagatcattatcaagggcgcctgcgagcacaacctcaagtgcatcgacgtc
gaaatcccccgtgaccagctggtggtgatcaccggcgtctccggctcgggcaagtcgacg
ctggccttcgacaccatctacgccgaggggcagcgccgttacgtcgagtctctttccgcc
tatgcccgccagttcctggagcagatggacaagcccgacgtcgagtcgatcgaggggttg
tcgccggcgatctccatcgagcagaagaccacttcgaagaacccgcgctcgaccgttggc
accgtcaccgagatctacgactacctgcggctcctcttcgcccgggtcggtcgcgtccat
tgccaccagtgcggcaaggagatcgccagccagaccgtcgagcagatggtcgaccacatc
ctcgcctggccggaaaagacccggctgttgctcctcgcgccgatcgtgcgcgggcgaaag
ggagaataccgcaaggagctgaagcagctgcaggcggacggtttcgtgcgggtgcgtatc
gacggggaaatctacgagctcgccgagacgccggaactcgacaagaagaagcagcatacg
atcgaggtggtcgtcgaccgcctggtcctcaaggaggaggtccgtacccgcctcgccgat
tcactggagacagccctgcgcctcgccgaggggctggtgcgggtggaggtggtcggcggc
gagtcgctggtcttctcccagcagcacgcctgcgtcgactgcggcatctcctacccggag
atcacgccgcggatgttctccttcaacaaccccttcggcgcctgtcccgcctgtgcgggc
ttaggcacccggatgtacttcgacccggagcaggtcgtccccaacccggcgctttcgctg
cgcgaaggggcgattgccccctgggagagccgcaccgggttttactaccagcaactgctg
gaagcactggccgatcattacggtttcgatatcaatgtcccctttgcccagctccccgaa
aagctgcagacagtcctgctgcacggctcggggaaggaggaggtgcgcttttacttcgac
cagggggggcggcgccatttctaccacaaggtcttcgaaggggtgatccccaacctcgag
cggcgctaccacgagactgactcggagaatgtgcgcgagaatctcgagcgcttcatgaac
gtcatgccctgcccgacctgcgagggggcgcgactgaaaaaggaatcgctcttcgtgcgg
attggcggacgcagcatccgcgaagtgacggcgctctccatcgtcgaggcggagcgctat
ttcagcgaactggagctgaccgccaaggagcaggagatcgcccggcggatcctcaaggag
gtccgcgaacgcctctcctttctcacccacgtcggtctcgactacctgaccctcgatcgc
accgccggtaccctctccggcggcgaagggcagcgcatccgcctcgcgacccaggtcggt
tcctccctggtcggcgtcctttatatcctcgacgagccctccatcggcctccaccagcgc
gacaaccggcgccttctcgacaccctgaaaaggctgcgcgacctcggcaacaccgtcctg
gtggtcgagcatgacgaggagacgattctcgaagccgaccatgtcatcgacatggggccg
gcggccggggtgcacggcggcgaggtggtcgcccaggggacgccgcaggagatcctcgcc
gatccgcgctccctcaccggccgctatctctccggcgagctgtcgatcccggttccggcc
gggcggcgcaagagcgagcgctcgctcaccattcgcggcgcacgggagaacaacctgaag
ggggtcgatgttgccattcccctcggggtgatgacctgcgtcaccggggtctccggttcc
ggcaagtcgacgctgattctcgataccctctacaaggccctcgcccagcgcctctaccgg
gccaaggagaaggcgggcaaggtcgacgacatcctcgggctcgaatatctcgacaaggtg
atcgacatcgatcagtcgccgatcgggcgcaccccgcgcagcaacccggccacctacacc
ggggtcttcaccgacatccgcgacctcttcgcccagctgccggaggcgaaaatccgcggc
tacaagccgggccgcttctccttcaacgtcaagggggggcgctgcgaggcgtgccagggg
gacggcatcatcaagatcgagatgcactttctccccgacatctatgtccagtgcgaggtc
tgcaagggggcacgttacaaccgtgagaccctggaggtgcgctacaaggggacgaacatc
gccgagctgctcgatatgacggcgaaccaggccgcgaaattcctggagaatatcccgcgg
atcaggaacaagctggagacactgcgcgatgtcgggctcggctacatcaagctcggccag
agcgccaccaccctctccggtggcgaggcacagcgcgtcaagctcgccaaggagctcggc
aagcgcgctaccggccgcacaatctatatcctcgacgaaccgaccaccggtctccacttc
gccgatatccagaaactgctcgatgtcctgcagcggttggtggagagcggcaacacggtg
gtgatcatcgagcacaacctcgatgtgatcaagaccgccgatcacctcatcgatctcggt
cctgagggggggagccgggggggcgaggtggttgcggtcgggaccccggaggaggtcgca
cgctcttcccgcagccataccggtcgctacctgcgcgcctatctcgacctctga
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