Dehalococcoides mccartyi VS: DhcVS_1170
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Entry
DhcVS_1170 CDS
T01136
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DhcVS_1170 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_1170 (mutM)
Enzymes [BR:
dev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DhcVS_1170 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DhcVS_1170 (mutM)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DhcVS_1170 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACZ62282
UniProt:
D2BIY2
LinkDB
All DBs
Position
complement(1078505..1079317)
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AA seq
270 aa
AA seq
DB search
MPELPEVETVKNEIMPHLLGKKITRIEALWAKTLCPPETEFNKLVSGLQVTELSRRGKYI
IISLSGGLFISVHLKMSGGLTAVKAENGQPPRFTRAVFHLENGEQVYFTDIRKFGRINLL
TSLDTILEKLGPEPLEEDFTPEVLSKRLSRRKGPIKAVLLDQRVLAGVGNMYADETLFKA
CLNPLRPADSLSKAEVINLHSAIRSVLYKAIQNKGASVSTYHRPDGSKGGAQLEFNVAHR
RGESCPICGAPITRQLIRQRACYFCPHCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcctgaagtggaaacggtaaaaaatgaaataatgccccatttgctgggc
aaaaagataacccgcatagaagctttgtgggctaaaacgctctgcccgcctgaaaccgag
tttaacaaactggtctcaggtttgcaggtaaccgagcttagccgccgcggcaagtatatt
atcatcagcttaagcggcgggctgtttatcagtgtgcatttgaagatgagcggcgggctg
acggcggtcaaggccgagaacggacagccgccccgtttcaccagagcggtttttcatttg
gaaaacggggagcaagtatatttcacggatatacgcaaatttgggcggataaacttgctt
accagtctggatactattttggaaaagcttggccctgaacctctggaagaggattttacc
ccggaagtgcttagtaaacgtctttcaaggcgtaaagggcctatcaaggctgttcttcta
gaccagagggtgctggccggggtgggtaatatgtatgcggacgaaactttgtttaaagcc
tgtctgaacccgctccgcccggctgacagcttgagcaaagcagaggtaataaaccttcat
tcggctattaggtcagttttatataaagctatacagaacaagggggcaagtgtcagcact
tatcaccgtcctgatggttcaaaggggggtgcccaactggagttcaatgtcgcccaccgt
aggggtgagtcttgcccaatctgcggtgcacctataacccgccagctgatacgccaacgg
gcctgctacttctgtcctcattgccaatcataa
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