Dehalococcoides mccartyi VS: DhcVS_1172
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Entry
DhcVS_1172 CDS
T01136
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03030
DNA replication
dev03410
Base excision repair
dev03420
Nucleotide excision repair
dev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DhcVS_1172 (polA)
03410 Base excision repair
DhcVS_1172 (polA)
03420 Nucleotide excision repair
DhcVS_1172 (polA)
03440 Homologous recombination
DhcVS_1172 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dev03032
]
DhcVS_1172 (polA)
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_1172 (polA)
Enzymes [BR:
dev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DhcVS_1172 (polA)
DNA replication proteins [BR:
dev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DhcVS_1172 (polA)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DhcVS_1172 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DhcVS_1172 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH
RecR_HhH
nSTAND_NTPase4
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ACZ62284
UniProt:
D2BIY4
LinkDB
All DBs
Position
complement(1079942..1082653)
Genome browser
AA seq
903 aa
AA seq
DB search
MNKPVIVLFDGTNLVHRAYHVLPPLAIRKTGEVVGAAFGFASILIKVLTDLKPDCYAISF
DRKGPTFRHEMFKAYKAQRPPMPDELVSQLGRVRQIVDAFNMPVYEQSGFEADDVLGTLA
TRAAAAGMEVIIASGDADSMQLVGPDIRILYPGPAGSFASTSLYDEAAVRAKYGLGPEHI
ADYKALMGDPSDNIPGVPGIGPKTAQKLIEEYGGIEDIYKNLDKISPPGLQKKLADNAEV
ARDSKILTTIVCDLPLDFSIEECRAEHYNRQKVVDLFRELEFFRLIDRLPGGENQLQGTP
DMFAAAPKVETRYTMADSQNIDSIVRRLGEAKELALAVSGTPEEAMDARLTALALSSAAG
DACFVLAEFIGSASEGQMFATEGHSGLAALLGDKKMSKTAHNAKYLMNLLLSAGQEVKGL
DFDTMIAAHLLGEKNLAIKDLVFEHFGIEIADIENILTRNGKKTIFNEVQLSEAAQLAAD
YTFRLKGIFAAQLAETRLMDLFARVEMPLLPILLGMERIGIMLDTDLLKAMAEKTGRQIF
KLEEDIYAQAGHSFNIGSPQQLGRILFDELKLPVIKKTKTGYSTGAEVLEELQGKHRIVD
LILEYRMLVKLKSTYLDTLPRMVNPHTRRLHTSFNQTRTATGRLSSSEPNLQNIPVRGEM
GREIRRAFIAPPGTVLLAGDYSQIDLRVLAHLSQDPALIEAFQSDQDIHTATAARLLNVS
PSKVTKEQRRLAKTVNFGVIYGMSSYGLEQATELSLEEADKFIKAYFEKYPRVAVYFAEI
KQQARTQGYVETLLGRRRYIPEINSPNRILRESAERMAINMPVQGTSADIIKLAMVRLDE
KIKEEKLKSRLLLQVHDELIFEVPTAELGRMSDLLIETMSGAVAFEIPLKVELKSGANWG
DME
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacctgtaatagtcctctttgacggcactaaccttgttcaccgggcatatcat
gtacttcctccgcttgccatccgcaaaacaggtgaagtagtgggtgccgcttttggtttt
gcatctatactgataaaagtcttaacagaccttaaaccggattgttacgccatatccttt
gacagaaaaggcccaaccttccgccatgaaatgttcaaagcatacaaagcccagcgtccg
cccatgcctgacgaactggtcagccagctggggcgggtacgccagattgtggatgctttt
aatatgccggtatacgaacagagcggctttgaggctgatgatgtgctgggtacgctggca
accagagccgctgccgcaggtatggaggttattatagcctccggggacgcagactccatg
cagctggtcgggccggatatccgcattttgtatcccggtccggcaggttcttttgccagc
accagtttgtatgacgaggcggcggtaagggcaaaatacggtttggggccagagcatatt
gcagattacaaagcccttatgggtgacccgtctgacaatatccccggagtacccggcata
ggcccgaaaaccgcccagaaacttatagaggaatacggcggcatagaagatatttataaa
aatctggataaaataagcccgcccggtcttcagaaaaagctggcagacaatgccgaagta
gcccgtgacagtaaaatactgacaactatcgtgtgtgatttaccgcttgatttcagtatt
gaggaatgccgggcagagcactataaccgccagaaagtggtagacctattccgcgagctg
gagtttttcaggctgattgaccgcttgccgggaggggaaaaccagcttcagggtacgcct
gatatgttcgctgccgctccaaaggttgaaacccgctatacgatggcagacagccaaaat
atagacagcattgtaagacgccttggtgaagccaaagaactggcgctggcggtttcgggt
actcccgaagaagctatggatgcccgcctgacggcactggcactttcaagtgcggcgggt
gatgcctgttttgtactcgctgagtttatcggcagtgcttcagaagggcagatgtttgcc
accgaagggcattccggcttggcagctctgcttggtgataaaaaaatgagtaaaaccgcc
cacaatgccaagtaccttatgaatttgcttttatctgccgggcaggaagtaaaagggctg
gattttgataccatgattgccgcccatctgttgggtgaaaaaaatctggctatcaaagac
cttgtctttgagcattttggtatagagattgcggatattgaaaatatactgacccgaaac
ggcaaaaaaaccattttcaatgaggttcagctttcagaagcggcccagcttgcggctgat
tacactttccgcctcaaaggtatctttgccgcccagcttgccgaaaccaggctgatggat
ttatttgccagggtggaaatgccccttttgcctattctgctgggtatggaacgcatcggc
attatgctggatacagatttgctgaaggctatggctgaaaagacaggcaggcagatattt
aaactggaagaagatatctatgcccaggcagggcatagctttaacataggctccccccag
caactggggcggatactctttgacgaattgaaactgccggttatcaaaaagaccaaaact
ggttattccaccggggcagaggtgcttgaagagctgcagggtaaacaccgtattgtagac
ctgatactggaataccgtatgctggtaaagctgaaatctacttatctggatacccttccg
cgtatggtaaacccgcatacccggcggttgcataccagtttcaaccagacccgtacagcc
accggcaggttgtcttcttccgagcctaatctgcaaaacatacctgtcaggggggaaatg
ggcagggagatacggcgggcatttattgcgcctccgggcacagtgctgctggctggagac
tattcccaaatagacctcagggtgctggcccatctttcccaagaccccgccctgatagag
gctttccaaagtgaccaggatattcacactgcaaccgccgccagattgctgaatgtatcc
ccgtccaaagtaactaaagaacaacgccgcttggctaaaaccgtaaatttcggggtgata
tacggcatgagcagctatgggctggaacaggctaccgagctttcgctggaagaagccgat
aaatttataaaagcctattttgaaaaatatccgcgggtggctgtttactttgcggagatt
aagcagcaggcacgtactcagggttatgttgaaaccctgctgggcagacgccgctatata
ccggaaatcaattcacccaaccgtattctgcgtgaatcagctgagcgcatggctatcaat
atgccggtacaggggacatctgccgacattatcaagctggctatggtcaggctggacgaa
aagattaaagaagaaaagctgaaaagccgcctgctgcttcaggtgcatgacgagcttata
tttgaagtacccacagcagagcttgggcggatgagtgatttgctcattgaaaccatgtca
ggtgcagttgcctttgaaataccgcttaaggttgagcttaagtccggggctaactgggga
gatatggagtaa
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