Dehalococcoides mccartyi VS: DhcVS_278
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Entry
DhcVS_278 CDS
T01136
Symbol
priA
Name
(GenBank) primosomal protein N, (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DhcVS_278 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_278 (priA)
Enzymes [BR:
dev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DhcVS_278 (priA)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DhcVS_278 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Trm112p
SBDS_N
Cas3-like_C_2
nSTAND_NTPase5
Zn_ribbon_6
AAA_16
FYVE_2
Zot
Zn_Ribbon_YjdM
FtrD-like
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ACZ61439
UniProt:
D2BGI9
LinkDB
All DBs
Position
complement(271385..273832)
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AA seq
815 aa
AA seq
DB search
MAFAELAVNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGPKIVQGIVLEITDQPAFGQTR
EICGVISDTPLLSFHQLKLAKWISQTYLCSIYEAVALMLPPSFERQSLAYISLETTPPAT
TKNPSETLSPNMQKIFDRLKAGDVTPQSELEKIFGKKTTQNALIKLINQGLVKRTYQISP
ARVQTKFEKHFRLSGQALAFIKNQNLPKLSPRQTDIFECLRKNPLGIAKSQLNLLFKNNS
AVLKALEQKGLVSTEEHQVFRQPVDYNQITPMLHLELSPPQAKCLQAITHSLNTLPENDP
NPRIFLLHGITGSGKTEIYLQSLAETLRLGRKGIVLVPEISLTPQTIARFAGRFPGKIAV
LHSRLSPGEQFDEWQRIKNGQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQDPQPR
YHTRTVANKMAEEYGTVVVLGSATPDIDSYFKAKHGIYQLLELPERLTPYRGASLPKTEL
VDMRTELSEGNRSIFSRNLHASIEKVLANHEQAILFINRRGGASFIQCRDCGYVAMCKSC
DAPLTYHPDQENLVCHQCGRQYPNPLTCPKCSSRRIKYLGIGTQKLEEETRLAFPQARLL
RWDSDVTRGKNNHQQIMDTFSRHQADILIGTQMVAKGLDLPAVTLVGVINADISLNLPDF
RAGERTFQLLAQVAGRAGRGISGGKVIIQTYTPENYAIQAAVCHDYQGFYAKEITYRREL
NNPPFRKLACIVFSHLNHDFCRQQAEVMAETFREKADAGGSGSLEILGPAPAFIQRLRGR
YRYQLILRSPNPADFLRNISFGQGWSIDLDPYGLC
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttggcttttgccgaactggccgtaaacactccggtacttagaccgggcagtttttcctac
tccataccattggggttagaaataaaacccggccaggcggtctgggctcctttcggacct
aaaatagttcagggcatagtccttgaaataactgaccagccggcattcgggcaaacacgt
gaaatctgcggcgttatctctgatacgccgcttctttcttttcaccagctaaagttagcc
aagtggataagccaaacctatttatgcagtatttacgaagcagtagccctcatgctgccg
ccgtcttttgaacgccaaagcctggcctatatcagcctggagaccaccccgccagctaca
acaaaaaacccgtctgaaaccctaagcccaaatatgcaaaaaatatttgaccggctaaaa
gccggagatgttactccccagagtgaactggaaaaaatattcggcaagaaaaccacccaa
aacgccctaatcaaacttataaatcaggggctggtaaaacgcacctaccagataagccct
gcaagggtacaaaccaaatttgaaaaacacttccgcctgagcgggcaggcattggcattt
attaaaaaccagaatctccctaagttatccccccgccagacagatatttttgagtgcctg
cggaaaaatccgctaggcattgccaagagccagctgaacctgctctttaaaaataattcg
gccgtcttaaaggctcttgaacaaaaggggctggtaagtaccgaagaacatcaggtattc
cgccagcccgtagattacaatcaaataacccccatgctgcaccttgagctaagccctcct
caggcaaagtgtttgcaggccatcacccattccctgaataccctgcctgaaaatgacccg
aatccccgaatatttttacttcatggcataaccggcagcggtaaaaccgaaatatatctg
cagtcactggctgaaaccctgcgtctgggcagaaagggtattgtactggtacccgaaata
tcccttaccccccagactattgcccgttttgcagggcgtttccccggcaaaatagccgtg
ctgcacagccgcctcagtccgggtgaacagtttgacgaatggcaaaggataaaaaacggt
caggcagatatcgtaatcggccccagaagcgccctttttgcccctctggacaaacccggc
attatcatcatagacgaagagcatgaatggacatataaacagcaggacccgcagccgcgt
tatcatacccgcaccgttgctaataaaatggctgaagagtacggtactgtagtggtactt
ggcagtgccactccggatattgacagctatttcaaagccaaacacggcatttaccagctt
ctggaactgcccgaacgcctgaccccctatagaggcgcttccctgccaaaaaccgagctg
gtagatatgcgcaccgaactctccgagggcaaccgcagcattttttcccgcaacctgcac
gcctccattgaaaaagtacttgcaaaccatgagcaggccattttattcataaaccgccgg
ggcggtgccagttttatccagtgccgtgattgcggttatgtagccatgtgcaaaagctgt
gatgctccgctcacatatcaccctgaccaggaaaatctggtctgtcatcagtgcggcagg
caataccccaaccctcttacctgcccaaaatgcagcagccgcaggattaaataccttggt
ataggcacccagaaactggaggaagaaacaagactggcttttccacaggcaagactgctg
cgctgggatagtgacgtaaccagaggcaaaaataaccaccagcagataatggatacgttc
agccgccatcaggcagatatacttatcggcacccagatggtagccaaagggcttgacctg
cctgcagttactctggtaggagtaataaacgcggatatcagcctgaacttgcctgatttc
agggcaggcgaacgtacgttccagctgctggcacaggtagccggacgggcaggccggggt
atatcaggagggaaagtgattatccagacctatacgcccgaaaactacgccattcaggca
gcagtttgccatgattatcagggtttttatgccaaggagataacctaccgccgggaactg
aataaccctcctttccggaaattagcctgcattgttttcagccatttaaaccatgacttt
tgccggcaacaggctgaagttatggctgaaaccttccgggaaaaagctgatgcaggcggt
tcaggcagtctggaaattttagggccggctcccgctttcatccaacgtctgcggggacgc
tataggtaccaactaatactgcgctcaccaaacccggcagatttccttcggaatatcagt
tttggacagggctggagtattgaccttgacccatatggcttgtgctaa
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