Dehalococcoides mccartyi VS: DhcVS_475
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Entry
DhcVS_475 CDS
T01136
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev00300
Lysine biosynthesis
dev00470
D-Amino acid metabolism
dev01100
Metabolic pathways
dev01110
Biosynthesis of secondary metabolites
dev01120
Microbial metabolism in diverse environments
dev01230
Biosynthesis of amino acids
Module
dev_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DhcVS_475 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DhcVS_475 (lysA)
Enzymes [BR:
dev01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DhcVS_475 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Integrase_Zn
Motif
Other DBs
NCBI-ProteinID:
ACZ61629
UniProt:
D2BH29
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All DBs
Position
441963..443267
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AA seq
434 aa
AA seq
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MEPRIQVFPKNTEVKNNHLVIGGADVTGLCAKHGTPLYIFDESTIRQNCRDFKREFSRRY
ADSSVSYASKAFLHPALLKILAEEGMSLDVVSGGELSIANNAGFPMDMVYFHGNNKSAEE
LRLALRLHVGRIVVDSFDEIKLLSKLADESGHIPDILLRLTPGVDAHTHHHITTGKLDSK
FGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGF
DIEELDIGGGYGVQYEIDKPAPAVSVYAEAIGAKIVAKCHSLKLAPPSLNIEPGRAIIAQ
AGVALYTVGVIKDIPGIRQYASVDGGMGDNIRPALYEAKYEAVVASNVQSAEKQKVTIAG
KFCESGDILITDIELPSLRAGDILAVPCCGAYCLPMSSNYNGYQRPAVVILKNGEDRLIR
RRETVEDLSRLDSV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagaatacaagtattccccaaaaacactgaagtaaaaaataatcatctggtt
attggcggagcggatgttaccgggctttgtgccaagcatggcacgccgctttatatcttt
gacgagtctactatccgccagaattgccgagatttcaagcgggaattttcacgccgctat
gctgacagttctgtcagttacgcttcgaaagcctttttacatccggctttattgaaaata
ttggccgaagaaggtatgagtctggatgtggtttcaggcggagagctttccatagccaat
aatgccggtttccctatggatatggtttatttccacggaaataacaaatctgccgaggaa
cttcggctggcactccggctgcatgtagggcggattgtagtagatagttttgatgaaatc
aaattgctttcaaaattggcggatgaaagcgggcacataccggatatactcctcaggctt
acccccggagttgatgcccacactcaccaccatattactaccggcaagctggattcgaag
tttggttttccgctgttccaggcagctgaggcggtaggtctggctatggcccaggccagc
ttaaatctggtagggtttcatttccatatcggttcccagatatttgaaactcagcccttc
cttgatgccatagatttggtattggattttgccgctcaggttcaggaacgttatggcttt
gacatagaagaactggatatcggcggcggctatggtgttcagtacgaaatagacaagcct
gcacctgcggtatcggtttatgcagaggctatcggtgctaagattgtagctaaatgtcat
agtttgaaactggcccctccaagcctgaatattgaaccgggacgggctatcatcgctcag
gcaggggttgcattgtatacggtaggggttatcaaagatatccccggcattcgtcagtat
gcctcggtggatgggggtatgggggataatatccgcccggctttatatgaggcaaagtac
gaagctgtggtggcaagcaatgtacaatctgctgaaaaacagaaagtaactatagccggt
aagttttgtgaatccggtgatatacttataacagatatagaattaccttccctgagagca
ggtgacatactggcagttccctgctgcggggcttactgtttgcctatgtccagcaactac
aacggctatcagcgcccggcggtagtaatactgaaaaatggtgaagaccgcctgatacgg
cggcgtgaaactgtggaagaccttagccgtttggattcggtctaa
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