Dehalococcoides mccartyi VS: DhcVS_490
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Entry
DhcVS_490 CDS
T01136
Symbol
sbcC
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dev
Dehalococcoides mccartyi VS
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_490 (sbcC)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DhcVS_490 (sbcC)
Archaeal homologous recombinant proteins
DhcVS_490 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
PUMA_CC
AAA_27
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACZ61644
UniProt:
D2BH44
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Position
complement(457715..460294)
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AA seq
859 aa
AA seq
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MIPVKLKIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVVSLNEQETEVSLDFEISGELYQVIRQRQRPKKTGANGQSLLSLFAIKDGKPLNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLSNILGLEIYDQLEDL
ARQAVREAEAKKLLIERSIADGQEGLKSRPELAKDLELTRLDLTDGEEKLKTHIAKLEIL
RHKKHAFDAKQSACLQIEKDLRDISKDQSLWLQNQQEIKERISTFETLIVQEADILKGYK
EYSDCQSLYEKHNRILAKLRQMEKEKKPLEDAVYKEENSLKNTLTKYQEHLKMRQETAQT
LDKLEQEKIQSDQLHLELENEESALKARQTKLADMQGSLAGLETEYAGTAREINSLEEKL
KLLTEAGESRCNCPLCETKLGQDKLKLVFGKYRTEQDTKEKQQSSLKIKLEQLRLDIQTL
TAQIETETKRLNQKRRQYEGQLSVLEKGIADAKDARTKAAKGRELISDIEKQLNERSYAV
SEQARLAVIEKEILELNFDNAEYTQNQQTLAGLTYFEEQKRKLNEAQSRLPLEKDRLENT
ASALVELTFRHDTKLSEQQTLQKELAELPELEQELETAEAGYKLLSQTQDNLRQQLGSLS
QKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKKDGIQTMLIEDTLPELESGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAVRI
ALSRLLANRLGAPLRTLIIDEGFGTQDSTGIERLKEAINSIQDEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaacttcatgtgctaccgcggcgaaattccgcct
ttttcttttaatggggtgcataccgcctgcatctgcggccaaaacggggcaggtaaatcc
gccctgatagatgccattacctgggcgctttggggaaaaagccgcgccaaaagtgatgat
gatgtagtgtctctaaacgaacaggaaactgaagtcagcctagattttgagatttcgggt
gaactttatcaggttatccgccaacgccaacgccccaaaaagaccggagcaaacgggcaa
agccttttaagcttgtttgccataaaggatgggaaacccctgaatatcaccggggatacc
ctgacccaaacagagaaaaagataatttccatactgcatatggactatgacacctttata
aacagtgcttttctgcggcaggggcatgccaaccagtttacccagcagccccccggcaaa
cgcaaggaagtactctccaacatactggggttagaaatatatgaccagctggaagacctg
gccagacaggccgtacgcgaggcagaggctaaaaaactgcttatagagcggagtattgca
gacggccaagaagggttgaaatccagaccggaactggcaaaagatttagaacttacccgc
ctagacctgacagacggtgaggagaaactgaaaacccatattgccaagctggaaatcctc
aggcataaaaaacatgcctttgatgccaaacaaagtgcctgcctccagatagaaaaagac
ctgcgggacatatcaaaagaccaatccctttggcttcaaaaccagcaggaaataaaagag
cgtatcagcacctttgaaacactcatcgttcaggaagcagatattctcaaaggctataag
gaatactcagactgccaaagcctgtatgaaaaacacaaccgaatactggcaaaattaagg
cagatggaaaaagaaaaaaaaccgcttgaagatgccgtttataaagaagaaaacagcctg
aaaaacaccctgactaaatatcaggaacacctcaaaatgcggcaggaaaccgcccagact
ttggacaaactggaacaagaaaaaatacagtcagaccaactgcacctggagctggaaaat
gaagagtctgccttaaaagcccggcaaaccaagctggcagatatgcaaggaagtttagcc
ggactggagaccgagtatgctggtacagccagagaaataaactctctggaagaaaaacta
aaactgcttaccgaagcaggtgaaagccgctgcaactgccccctgtgcgaaaccaagctg
gggcaagacaaactcaaactggtattcggcaaataccggacagaacaggatactaaggaa
aaacagcaaagcagcctgaaaataaagcttgagcagctaaggctggatatacagacccta
actgcccaaattgaaactgaaaccaaacgcttaaaccaaaaacgcaggcagtatgaggga
cagctgagcgtattggaaaaagggattgcagacgccaaagatgccagaaccaaagcggca
aaaggcagagagctgatttctgatattgagaagcagctgaacgaacgcagttatgccgtt
tccgagcaagccaggctggcagtaattgaaaaagagatactggaactgaattttgataat
gccgaatacacccaaaaccagcaaactttggccggcctgacctattttgaggaacaaaaa
cgcaaactgaacgaggcacaaagccgcctgcctcttgaaaaggatagactggaaaacacg
gcttcggcactggtagaactcaccttccgccatgatactaaactgagtgaacagcaaacc
ctgcaaaaagaactggctgaactgcccgaactggagcaggagctggaaaccgccgaagcc
ggatacaagttactcagccaaacgcaagataatctgaggcaacaactgggttcgctcagc
cagaaagaagagcagctgaacgaacttgaaaagaagctgaaaaaacaggagcaggataaa
gagcaaaccgccaaagaaatatactactttggtaaactggccagagctttcggcaagaaa
gacggcatccagacaatgctcattgaagacaccctgcccgaactggaaagcggggcagac
ctgctgctgtcacggatgactgacgggcgtatgcaccttagtatagaaacccagcgctca
accaaaaagggtgaccagaccgagactctggatataaatatctcggatgagcttggcacc
cgcaactacgaaacattcagcgggggtgaggctttcaggatagattttgcggtcaggatt
gccctgtcacgcctgctggcaaaccgtctgggcgcacctttgcggacgctgattattgat
gaagggttcggcacacaggactcgaccggtattgaacgcctgaaagaggctataaactcc
attcaggatgagtttgacaagatactggtcataacccatatagatgacctgaaagattct
ttccccacccgcattgagatagataaaaccccgtcaggctcagctatacgcttaaactaa
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