Dehalococcoides mccartyi VS: DhcVS_551
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Entry
DhcVS_551 CDS
T01136
Name
(GenBank) radical SAM superfamily
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
dev
Dehalococcoides mccartyi VS
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dev03016
]
DhcVS_551
Enzymes [BR:
dev01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
DhcVS_551
Transfer RNA biogenesis [BR:
dev03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
DhcVS_551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-ProteinID:
ACZ61703
UniProt:
D2BHA3
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All DBs
Position
521163..522542
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AA seq
459 aa
AA seq
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MKKLSRTISGVTPVAVMTKPLPCPGKCIYCPTFDATPQSYTPESPAVLRAKSCEYQAYKQ
VALRLRIIQDMGHPTDKVELIVMGGTFLSADTAYQYGFIKDCYDALNGIVAGSLEEAKTI
NETAQHRCVGLCIETRPDICGETEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADV
AEATRLLREYGLKVHYHWMPGLPGSAPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTV
LEEWWKEGRYTPYPSDIMTGLIADIKALVPPYVRISRVLRDIPAVFISAGLKDSLRDGVR
QILESRHQKCRCIRCREYGHRQRKGQTSGEPTLRRLDYPASEGNEIFLSFEDSSDTLYGL
LRLRIPRLSLPVPDKKYGGKIGLVRELHVYGIELSLGEQRDQSAQHRGLGRKLVAEAERL
AHDEYGLSSLAILSGVGAREYYRSLGYELSAGYMCKRLA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctttcccgaacaatatcaggcgttaccccggtggcggttatgaccaaacct
ctgccgtgtcccggcaagtgcatatattgtcctacttttgatgccactccccagagctat
acacctgaatctccggctgttttgcgggctaaaagctgtgaatatcaggcttacaaacag
gttgcccttcgcctgcggataatacaggatatgggtcaccctacagataaggttgagctt
atagttatgggtggtactttcctttcagcagataccgcctaccagtatggtttcattaaa
gactgctatgatgcgttgaatgggatagtggctggcagtctggaggaagctaagactata
aatgaaactgctcagcaccgctgcgtaggtttatgcattgagacccgcccggatatctgc
ggtgagaccgaaatacagcggatgatagatttcggaactaccagagtggaacttggcgtc
cagatgctggatgatgatatttataaactggttgaacggggacatacagttgcggatgtg
gctgaggccacccgccttttgcgtgaatacggcctaaaagtgcattaccactggatgccc
ggacttcccggttcagcccctgaaaaagatctggcactttcccgcatggtgtttgaagat
ccccggttttgccctgacgggcttaagctttatcccactatggtagtggaggggactgta
cttgaggagtggtggaaagaaggcagatatacaccgtacccaagtgacatcatgaccggg
cttattgcggatattaaagctctggtgccgccttatgtgcgtatctcacgagttcttcgg
gacataccggcggtatttatcagcgcgggactcaaagactccctgagggatggtgttcgg
cagatactggaaagccgccaccaaaagtgcaggtgtatacgctgtcgtgaatatggccac
cgccagcggaaaggacaaaccagtggtgaacccaccttaaggcgacttgattatcctgct
tcagagggcaacgagatatttcttagctttgaggattcttccgataccctttatggtttg
ctcaggttgcgtatacctcgtttatccctgcctgttccggataaaaaatacggcggtaaa
atagggctggtacgtgaactgcatgtatatggcatagaactctcactgggtgaacagaga
gaccagtctgcccagcaccggggtcttggcagaaagctggtggccgaggcagaacggctt
gcccatgacgaatacggccttagctcactggcaatactaagcggtgtgggcgccagagag
tattaccgttcactcgggtatgaactttcggcagggtatatgtgtaagcgtctggcttga
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