Dehalococcoides mccartyi VS: DhcVS_56
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Entry
DhcVS_56 CDS
T01136
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
dev
Dehalococcoides mccartyi VS
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dev03110
]
DhcVS_56 (clpC)
Chaperones and folding catalysts [BR:
dev03110
]
Heat shock proteins
HSP100
DhcVS_56 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_14
AAA_18
IstB_IS21
ATPase_2
nSTAND3
AAA_28
Roc
RsgA_GTPase
NACHT
bpMoxR
RuvB_N
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
ACZ61230
UniProt:
D2BK18
LinkDB
All DBs
Position
50378..52852
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AA seq
824 aa
AA seq
DB search
MSSRFDKFSERARRVLTYAQEEAQNLNHNYIGTEHILLGLVREEEGVAARVLVNMEVNLA
KVRSAVEFILGRGEHPATSETGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGE
GAAAGVLESFGVTVEKVRTEVGRILNQGLNKPKTSRTTPSRTPQLDQLGFDLTAAARTGK
LDPVIGRAKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKH
IISLDVASLVAGTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAAN
ILKPSLARGEVQVIGATTLDDFRKYVERDAALERRFQPVLVEEPAIEDTLNILRGIKERY
EEHHKLIISEEAIAAAANMAARYIPDRFLPDKAIDLVDEAASRVRIKKRTKPVSLKEMKA
IEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMEDEWQNEQAMDKPVVGEEDIAQ
VVSMWTGVPLVQLTGDETERLLHMEEALHERIIGQEEAIVTISKAVRRARAGLKDPRHPI
GNFVFLGPTGVGKTELARALAQFMFGSEDALVRLDMSEFMEKFAVSRLVGAPPGYVGYDE
GGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGHLTDAKGRRVDFRNTIIIMTS
NIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFH
SLNKEQIRSIVDLMLKSVIKQMSEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTM
IEDRLSEDLLRAKFKAGDKVIVDIAEDEIIVRLAEPAELSQATS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtagatttgataaattttctgaaagagcgcgccgggttcttacctatgcacag
gaagaggcccagaaccttaaccataactatatcggtaccgagcatattctgctggggctg
gtaagggaagaagaaggcgtggctgctcgagtactggtcaacatggaagtaaatttggcc
aaagtacgttctgccgttgaatttatacttgggcggggcgaacacccggctacctctgaa
accggtcttacctccagagccaaaaaggtaatagaactgggtattgatgaagccagaaac
ttggggcacaactatatcggcactgagcacctgcttttaggtttactgcgcgaaggtgaa
ggagcagcagccggtgtgcttgagagtttcggggttactgttgaaaaggtacgcaccgaa
gtggggcgtattttaaatcagggcttaaataaacctaaaaccagccgtacaactcccagc
cggaccccccagcttgaccagctgggctttgaccttacggctgctgccagaaccggcaag
cttgacccggttatcggtcgtgccaaagaaatagagcgggtcgttcagattctttcccgc
cgcactaaaaataaccctgcccttatcggcgaacccggtgtcggcaaaacctccattgta
gaggggctggcccagcggattgtttcgggtgatgttccggaaactttggagcagaaacat
ataatctcgctggacgtggcctcactggtagccggtactaaataccggggtgaatttgag
gaacggctcaagaaagttattgaagaaattaaaaacgcaggcaatataatcctgtttata
gacgaatttcataccatggtgggtgccggtgccgccgagggtgcggtagatgccgctaat
atcctcaagccttcgctggccagaggcgaggtacaggtaataggggcaactaccctggat
gactttcgcaaatatgttgagcgggatgccgcacttgagcggcgtttccagccggtgctg
gtggaagaaccggccatagaagataccctgaatattcttcgcggcataaaagagcgctac
gaagagcatcataagcttatcatcagcgaagaagctattgccgctgccgccaatatggct
gccagatatatacctgaccgctttttgccggacaaggctatagatttagttgatgaggcc
gcttcacgggtgcggataaagaaacgcaccaagccggtctctttgaaagagatgaaagcc
atagaagacagctaccgccgggataaagaagccgctttggcaacccagcagtatgactat
gcttccgaattgcgtgagcgtgagcttcagatagctgaaaagatacgccgcatggaagac
gaatggcagaacgaacaggctatggacaagccggtagtgggcgaagaagatattgcccag
gtagtcagcatgtggacgggtgtgccgctggtacagcttaccggtgacgaaaccgaacgt
cttttacatatggaagaagccctgcatgagcggattatcggccaggaagaagctattgtt
accatatccaaggctgtcagacgggcacgggccggtcttaaagacccccgccaccccatc
ggcaattttgttttcctcgggcctaccggcgtgggtaaaaccgagctggcacgggcgctt
gcccagtttatgtttggttcggaagatgctttggttcggctggatatgtccgaatttatg
gaaaaatttgccgtatcccgtctggtgggtgcgcctcccggatatgtgggttatgatgag
ggcggtcagctgactgaagccgttcgccgcaagtcgtactgcctgatactgttggacgaa
atagaaaaagctcatcctgatgttttcaacatacttctgcagatatttgatgacggccac
ctgacagatgccaagggcagaagggtggatttcaggaataccattattatcatgacctca
aacattggggctgagcttatccgcaagggcagcgggactatcggttttgctacccagaca
gatgaatcaaaggctcagcaaactaactttgagcatatgaaagacaagctgctgggtgag
ctcaagaagagtttccgtccggaattcttgaaccgcattgacagcgtggtggttttccac
tcgctgaacaaagagcagattcgcagcattgttgacctgatgcttaagagtgttatcaag
cagatgtctgaaaagggtatcgggcttgaagtgactgaatctgccaaagacctgctgggc
aagaaaggttatgatgaggtttatggtgcaaggccgctgcgccgcactatacagaccatg
atagaagatcgtctgtccgaggaccttctgcgggctaaatttaaagctggggataaagtg
atagtggatattgctgaagatgaaataattgtccgtctggcagagccggctgagcttagt
caggctacttcgtaa
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