Dehalococcoides mccartyi VS: DhcVS_837
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Entry
DhcVS_837 CDS
T01136
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03410
Base excision repair
dev03430
Mismatch repair
dev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DhcVS_837 (recJ)
03430 Mismatch repair
DhcVS_837 (recJ)
03440 Homologous recombination
DhcVS_837 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_837 (recJ)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DhcVS_837 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DhcVS_837 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DhcVS_837 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACZ61965
UniProt:
D2BI15
LinkDB
All DBs
Position
777625..779325
Genome browser
AA seq
566 aa
AA seq
DB search
MKILANCLWKLKPAPPEKTSQNFPYPPLISRLLHNRGIETVEEAELFLSSDRRLNHNPFL
FPDMEKAVSRIYKALLTGEKIVVYGDFDADGLTATAVLTTGIARLGGNVTPYIPHRVTEG
YGLKISALEKHRTEGVSLIISTDCGITAIPEIKRANKIGLDVIVTDHHTPLDELPPAYAI
INPKVPGETYPFKELAGVGVAYKLIQALYRNLGREDETRDLLDLVAIGTIADIVPILNEN
RYLVKEGIKLLNAEPRPGIIEMAQLSRLHLGEIEPESISWIMAPRLNAAGRLQHALAGYK
LLTATTISDSQELALWLENKNTERQQLTVHFVEKARARLDTQFLPALLIFIDAECPQGIS
GLVAGRLSDEYYRPSIVIKTNADSATGSCRSIPDFNIIQALSRFAHLFSHFGGHAQAAGF
TLPIENLDAFAQGISAYAEETLSGVELKPFIDIDIDTDLSVLCPATLRELERLAPFGEAN
PKPVFLSRGLNITDYRSMGSNNEHLKLRIKHKGRFWDGVAFRQAKELNGFLQSPVDIVYN
LEQDKWCGTDTLRLKIIDMSPAGTKI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatattggctaattgcctctggaaactaaaaccggcacctccggaaaagactagc
cagaattttccttatccgcccttgattagccgtttgcttcataacaggggtattgaaacc
gttgaagaagctgagttgttcctgtcatcagacaggcgtctaaatcataacccattctta
tttcctgatatggaaaaagcagtcagccgtatctacaaagccttgctgacaggtgaaaaa
atagtagtatacggggattttgatgctgacgggctgacggctacagcagttttaaccacc
ggcattgcccgtttgggagggaatgtaaccccttacattcctcaccgcgttactgaaggg
tatggtttaaaaatatccgcccttgaaaaacaccgaacagagggtgtttcacttatcatc
agcacagactgtggcatcaccgctatacctgaaataaagcgggcaaataaaatcgggctg
gatgtgatagtcacagaccaccataccccgctagatgaactgccgcctgcatatgccatt
ataaaccccaaagtacccggcgaaacctacccttttaaggaactggcaggagttggggta
gcgtacaaacttatacaggctttataccgcaacttggggcgggaagatgaaaccagagat
ttactggacttggtagctataggcacaattgctgatatagtacccattctgaatgaaaac
cgttatctggtaaaagagggcatcaaactcctcaatgccgaacctcgtcccggcattatt
gaaatggcacagcttagccgtctgcatctaggggaaatagaaccggagagcatttcgtgg
ataatggcaccccgcctgaacgcagccggaaggctgcaacatgctctggcaggatataaa
ctgcttaccgccaccaccataagtgattctcaagaactggcactctggcttgaaaacaaa
aacaccgaacgccagcagctgaccgttcattttgtagaaaaagccagagctaggctggat
acacagtttctgcctgcattacttatattcattgatgccgaatgtccgcaaggtatcagc
gggcttgtggcaggcagactgtccgatgaatattaccgtccgtctattgttataaagacc
aacgcagattcggctacaggcagttgccgcagcataccggatttcaatatcattcaggcc
ctcagccgctttgcacatctgttcagccacttcggcgggcatgcccaggcagccggtttc
accctgcccatagaaaatttggatgcatttgcccaaggcatatccgcttatgccgaagaa
accctaagcggtgtagaactgaagccgtttatagatatagatatagacacagatctaagt
gtactctgcccggccaccctgcgtgaacttgagaggctggctccattcggagaggcaaac
ccaaaacctgtgttcctaagccgggggctgaatattactgattaccgctccatgggcagc
aacaacgaacacctgaaattgcgtattaaacataaaggccgcttctgggatggagtggcc
tttcgccaggcaaaagaactgaatggttttctccaatccccggtggatatagtgtataat
cttgaacaggataaatggtgcggaacagatacactccgcctgaagataattgatatgtca
cccgcaggtaccaagatttaa
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