Dehalococcoides mccartyi VS: DhcVS_843
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Entry
DhcVS_843 CDS
T01136
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DhcVS_843 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dev03019
]
DhcVS_843 (pnp)
03016 Transfer RNA biogenesis [BR:
dev03016
]
DhcVS_843 (pnp)
Enzymes [BR:
dev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DhcVS_843 (pnp)
Messenger RNA biogenesis [BR:
dev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DhcVS_843 (pnp)
Transfer RNA biogenesis [BR:
dev03016
]
Prokaryotic type
tRNA degradation factors
DhcVS_843 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_KhpA-B
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Alg14
Motif
Other DBs
NCBI-ProteinID:
ACZ61971
UniProt:
D2BI21
LinkDB
All DBs
Position
784027..786189
Genome browser
AA seq
720 aa
AA seq
DB search
MITANSFERTIGGRKLIIESGKIARLADAAVTIRYADTELLVTLCAAKKPREGVDFLPLT
IDYEERMYAAGKIPGGFIRREGRPSEQAILAGRLTDRPLRPLLPKEWRNELQIIITVIAS
DKENDADIWGVVGASTVLTMSQIPYEGPVGASRVGYINGEFVLNPTFAQLEQSQMDLVVV
STRKAVVMIEAGSKEIPEDLMIKAIEFAHQANQELIDLQDEIRAKLGKEKLPVPVLEIPE
EVKAAVAAFVKGRVNEALSYQDKTLRENAVEALQSELVEALAETYAEGDILAAYDKEIKK
AIRSTILEKDIRVNGRGIKQLRQLDAETGILPRVHGSALFTRGDTQVMAVTTLGSLQESQ
QLDGLSAEDTKRFMLHYNFAPFSTGEVKRSGSPGRREIGHGALAERALVPVLPTPEEFPY
TIRMVADVVGSSGSTSMGSVCSSSLSLMDAGVPVKKAVAGISIGLITGENDTYCTITDIE
GIEDNYGDMDFKVAGTRDGITAIQVDMKVKGISFDVIRDAIYQAKEARYNILEVMDKALA
QPKTELSPYAPRMYKISIDPSKIGSVIGSGGKTIRSIIEQTNTTVDIENDGTVVIGATDE
ASAQKAIKIIEDLTKDIEAGSVYTGKVTRIMTFGAFVEILPGKEGMVHISELADHRVEKV
EDIVKVGDEITVKVTEIDSQGRVNLSRRVILNPNAVPISRNRDSQPRRSGPFRPQDRSNS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgataactgccaactcatttgaacgaactattggcggcagaaaacttattatagagagc
gggaaaatagcccgccttgcagatgccgcagtaactatccgctatgcggataccgaatta
ctggtaacactttgtgctgccaaaaaaccgcgcgaaggggtggatttcctccccctgact
atagactacgaagagcggatgtatgccgcaggcaaaatccccggcgggtttatccgccgc
gaaggacgccccagtgaacaggctattttggccggacgtctgacagacagacctcttcgc
ccccttctccccaaggagtggcggaatgaacttcagattattatcaccgtaattgcctca
gacaaggaaaatgacgctgatatctggggtgtggtaggtgcttcaaccgttctcaccatg
tcacaaataccctacgaaggcccggtaggagccagccgcgtaggctatatcaatggcgaa
ttcgtgcttaaccccacctttgcccagctggaacaaagccagatggatttagtggtagtc
agcacccgcaaagccgtggttatgattgaagccgggtctaaggaaattcccgaagacctt
atgattaaagcgattgagtttgcccaccaggcaaatcaggagcttattgacctgcaggat
gaaatccgcgccaagctgggcaaggaaaaactgccggtgccggtgctggaaatacctgaa
gaagtcaaagcagcggtagccgcctttgtaaaagggcgggtaaacgaagctctgagctat
caggataaaaccctccgtgaaaatgcggttgaagcccttcagagcgaactggttgaagct
ttggcagagacatatgccgaaggcgatattctggccgcttatgataaagaaatcaaaaag
gctatccgttcaactatacttgaaaaagatatcagggtaaacggacggggtattaaacag
cttcgccagctggacgctgaaacaggtattctgccccgcgttcacggctcagctttgttc
acccgcggtgatacccaggttatggccgttaccactctgggttctttacaggaatcccag
cagctggatggcttgagtgccgaagataccaagcgttttatgcttcactacaattttgcc
cccttctctaccggtgaagttaagcgttccggctcccccggacggcgtgaaatcggccat
ggtgctttagccgaaagggctttggtgcctgtcctgcccactcccgaagaatttccctat
accattcgtatggtagctgacgtagtcggttcatcaggctctacttctatgggcagtgtc
tgttcgtccagtttgtcacttatggatgcaggcgtacccgtcaaaaaagctgttgccggt
atctccatcggccttattaccggtgaaaatgatacctactgcaccattactgacattgaa
ggtattgaagataactacggcgatatggatttcaaagttgccggtacccgtgacggcata
accgccatacaggtggacatgaaggtcaagggtatcagttttgacgttatccgtgacgct
atctaccaggccaaagaagcccgctataacatactggaagtaatggacaaggctcttgcc
cagcccaagaccgagcttagcccttacgcccccagaatgtacaagataagcattgacccc
tccaagattggcagtgttatcggcagcggcggcaagactatccgctctattattgagcag
accaatactaccgttgatattgaaaatgacggcacagtggttatcggcgctactgacgaa
gcttcggcccaaaaggctatcaagataattgaagacctgactaaagatattgaagccggc
agtgtttacaccggtaaagttacccggataatgaccttcggtgctttcgttgaaatcctg
cccggcaaggagggcatggtacatataagcgaactggctgaccacagagtagaaaaagtg
gaagatatagtcaaggttggtgatgaaataacggtaaaagttaccgagattgattcccaa
ggcagagtaaatttgtcacggcgggtcattctcaaccccaacgccgtacccatttcacgt
aaccgtgattcccagccgcgtcgttctgggcctttccgccctcaagaccggtccaactca
taa
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