Dehalococcoides mccartyi VS: DhcVS_853
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Entry
DhcVS_853 CDS
T01136
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dev
Dehalococcoides mccartyi VS
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dev03016
]
DhcVS_853 (truB)
Enzymes [BR:
dev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DhcVS_853 (truB)
Transfer RNA biogenesis [BR:
dev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DhcVS_853 (truB)
Prokaryotic type
DhcVS_853 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACZ61981
UniProt:
D2BI31
LinkDB
All DBs
Position
complement(794963..795865)
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AA seq
300 aa
AA seq
DB search
MDGILNINKPFGITSFDVVSKIRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGTETDSYDSEGEVTSRKPFDRITREMIQTALLDFQGKITQIPPMYSAV
KHRGMRLYNLARQGIEVERNPRTAMIYSIKLLDCNLPVLRLRIECGHGTYIRSIAFDLGR
KLGCGAYLKSLVREAYGQFNLTKSLSFADLEAAKNEGKLQDILLPPEIAIGHLPRVTLDE
KDITRLVNGLEITLEQNDRPEVIAVYNTKNRFAAIIQPESDGSWHPAKVFVNQCLKENAD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatggcatcttgaatatcaacaagcccttcgggataacctcctttgatgtggtttca
aaaatcagacgtatttactctcagaaacgagtagggcatggaggtacgcttgacccgtat
gccaccggagttatccccgtttttttaggcagatctacgcgtctcatagagtacctttct
tctgtcagcaagacatatctggctgaaatagagctggggacagaaacagatagttatgat
agtgaaggcgaggtcacttcccgaaaaccctttgaccggattacacgtgaaatgatacaa
acagcactgctggattttcagggtaagattactcaaatacctcctatgtatagtgccgta
aaacatcgcggaatgcggctttataatctggctcgtcagggtatagaggtagaaagaaat
ccccggacagccatgatttatagcataaaactgcttgactgcaatttgcctgtactgcgt
ttacggatagaatgtggacatggtacatatatacggtctatcgcttttgacttgggcaga
aaactgggctgcggggcatatctgaaatcactggtcagagaagcttacgggcaatttaat
ctgacaaaatctctttcgtttgctgaccttgaagcagccaagaatgaaggaaaactccag
gatattttgcttccacccgaaatagccatagggcatttgcctagagtgacccttgatgaa
aaggatataacacgcttggtaaatggtttggagataacactggagcaaaatgacaggcct
gaggtaattgccgtatataacacgaaaaacagatttgcggctataatccagccggagagt
gacggcagttggcatccggcaaaagtattcgtaaaccaatgcctgaaagagaatgcggat
tag
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integrated database retrieval system
