Dehalococcoides mccartyi VS: DhcVS_979
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Entry
DhcVS_979 CDS
T01136
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dev
Dehalococcoides mccartyi VS
Pathway
dev03420
Nucleotide excision repair
dev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DhcVS_979 (uvrD)
03430 Mismatch repair
DhcVS_979 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dev03400
]
DhcVS_979 (uvrD)
Enzymes [BR:
dev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DhcVS_979 (uvrD)
DNA repair and recombination proteins [BR:
dev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DhcVS_979 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DhcVS_979 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ACZ62097
LinkDB
All DBs
Position
complement(909430..911646)
Genome browser
AA seq
738 aa
AA seq
DB search
MQDILTGLNPAQKQAVEVVEGPVLILAGPGSGKTRVITHRIAYLIKIVGINPHRIMAVTF
TNKAAREMETRLNLLAPSAAGRLTMGTFHAICARILRQDGLPLGVPADFVIYDDDDQQSL
IKQAMAELELDPKRYPPASIRNAISQAKSQLVLPAYYFEKGRSYFEEVVGRVYELYEKRL
KQNKALDFDDLLLKVVQLFKQHPEVLARYQERYLHVMVDEFQDTNLVQYELVKMLSAKYK
NICVVGDPDQSIYSWRSADLRNVFNFETDNPGAKVILLEQNYRSTKNILEAASCVIAPNS
GRKPISLWTENESGQPIAVVETFNEQEEAQFVVSEIEKLTRYEKFSPGDIAILYRTNAQS
RALEEAFIRYGMPYRLVSGTRFYQRREVKDIVAYLRLLQNPQDSVSLQRVINIPTRGIGA
KTLSDLGQFAREQDISLYESLVNLSDENAPKPPIPSRGLKPLTDFGLLLKSLVADARNLP
LLNLLDRLLEGINYREFLFASEDGEERWDNILELRTVAQQYQEIAPPEGLSAFLESVALV
SDLDSLEEGVSAVTLITLHQAKGLEYPVVFMVGMEEGVLPHSRSFDDPAQMQEERRLCYV
GVTRARKRLYLVRAFRRSLMGQSNVNEPSRYLKDIPQSIIKGREKQPPPGQHTAASAASP
VIKQRLQSAGMSIKSASPPAPKLLELEAGDKVLHPQFGEGIVTSINRVKNDAEVMISFHS
VGMKRLMLSFARLTKLEN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatacttacagggctgaaccccgctcaaaaacaggccgttgaagtagtggaa
gggccggtgcttatactggccggtccgggcagcggtaaaaccagggttattacccaccgg
attgcctaccttattaaaatagtaggtataaacccccaccgcattatggctgttaccttt
accaacaaggccgcccgcgaaatggagacccgcttaaacctgctggctccctcagcggcg
ggacgcctgactatgggtacttttcacgctatctgcgcccgcatactcaggcaggacggt
ctgcctttaggtgtgccggctgactttgtaatatatgatgatgatgaccagcaaagcctt
atcaagcaggctatggcagagcttgagctggaccccaagcgttatccgcccgcttccatc
agaaatgccatcagccaggccaaaagccagctggtgcttccggcgtattactttgaaaaa
ggccggagctattttgaagaagtggtaggcagggtttatgaactctacgaaaaacgcctt
aagcagaacaaggcactggattttgatgacctgctgctgaaggttgttcagctgttcaaa
cagcaccctgaggtgctggccagatatcaggaacgttatctgcatgtaatggtagatgag
tttcaggataccaatctggttcagtatgagctggtaaagatgctgtctgccaagtacaaa
aatatctgtgtggtgggtgaccctgaccagtccatttattcctggcgttcggcagacctg
agaaatgtctttaactttgagacagacaatccgggtgccaaagtgattttgctggagcag
aattaccgctctactaaaaatattctggaagcggcttcgtgtgtaattgccccgaacagc
gggcgtaaacctatcagtttgtggactgaaaacgaatccggccagcctatagcggtagtt
gaaacctttaacgagcaggaagaagcccagtttgtggtttctgaaattgaaaaactgacc
cggtatgaaaagttcagtcccggtgatatagctattctttaccgtaccaatgcccagtca
cgggctctggaagaggcatttatccgctacggcatgccttaccgtctggtttccggcacc
cgcttttaccagcggcgtgaggttaaagatattgtggcttatctgcgtttgctgcaaaac
cctcaggatagcgtcagcctccaaagggttataaacatacccacccgcggcataggggct
aaaaccctttcagatttgggccagtttgccagagagcaggatatcagcctgtatgaatca
cttgtaaatttatcagatgaaaatgcccccaaaccgcccatacccagccggggcttaaaa
cccctgactgacttcggtcttttactgaagtcactggtggcggatgcccgtaatctgccc
cttttaaacctgctggacaggctgcttgagggcataaattaccgtgaattcctgtttgcc
tccgaagacggggaggagcgctgggataatatacttgaactgcggacagttgcccagcag
tatcaggaaatagccccgcccgaagggctttcggcttttctggaaagcgtggccctggta
tcagatttagacagccttgaagaaggtgtttcggccgttactcttattaccttgcatcag
gccaaagggctggaatacccggtggttttcatggtgggtatggaagagggtgtcctgcca
cacagccgttcgtttgatgaccccgcccagatgcaggaagaacgccgcctgtgttatgtg
ggtgtaacccgtgcccgcaagcggctttacctggtgcgggctttccgccgctcccttatg
gggcagagcaatgtaaacgaaccatcacgttatcttaaggatataccccagagtatcatc
aaaggccgtgaaaaacagcccccacccgggcaacatactgccgcttcggcagcttcaccc
gttatcaaacagcgtctgcaaagtgcgggcatgtccattaagtcagcgtctcctcccgcc
cccaaactgctggaacttgaagcgggtgataaggtgctgcacccccagtttggcgaaggg
attgtaaccagtatcaaccgggtgaaaaatgatgccgaggttatgatatctttccattcg
gtaggcatgaaacgcctgatgctcagctttgcccgcctgaccaaactggaaaactag
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