Devosia sp. D6-9: GHV40_00110
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Entry
GHV40_00110 CDS
T10671
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
devd Devosia sp. D6-9
Pathway
devd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GHV40_00110 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
devd03019
]
GHV40_00110 (pnp)
03016 Transfer RNA biogenesis [BR:
devd03016
]
GHV40_00110 (pnp)
Enzymes [BR:
devd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GHV40_00110 (pnp)
Messenger RNA biogenesis [BR:
devd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GHV40_00110 (pnp)
Transfer RNA biogenesis [BR:
devd03016
]
Prokaryotic type
tRNA degradation factors
GHV40_00110 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
PCB_OB
OB_RRP5_4th
aRib
Motif
Other DBs
NCBI-ProteinID:
QMU99983
LinkDB
All DBs
Position
complement(17683..19818)
Genome browser
AA seq
711 aa
AA seq
DB search
MFFNTHKVELNWGGQPLTLETGKVARQADGAVMATLGETVVLATVVSAKSAKPGQDFFPL
TVNYQEKYFAAGKIPGGYFKREGRPTENETLTSRLIDRPIRPLFPDGYKNETQVIVTVLQ
HDMENEPDILAMVAASAALTISGVPFMGPIGAARVGYIDGQYVLNTAIDKRVDSKLDLVM
AGTADAVLMVESEAQELSEEVMLGAVMFGHEASRKVIEAIIKLAELAAKDPRDFTAPDYS
ALEKDVLAVAETDLRAAYQITKKEDRYAAVDAAKAKVKEHFAQAIEDGTVSAEALGEVIH
NLQAKIVRWNILDTGKRIDGRDLVTVRPIVAEVGILPRTHGSALFTRGETQALVVATLGT
GDDEQFVDSLEGTEKVNFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAINPIRPKS
EEFPYTIRVVSEITESNGSSSMATVCGTSLALMDAGVPMKKPVAGIAMGLILEGDRYAVL
SDILGDEDHLGDMDFKVAGTADGVTSLQMDIKIAGITEEIMKVALGQAKGGREHILGEMA
KALTASRDSVGEFAPRIESITIPTDKIREVIGSGGKVIREIVEKTGAKVDINDDGTVKVS
SSDGKAIDAAIKWIRSITDEPEVGHIYQGTVVKTADFGAFVNFFGAKDGLVHISQLAEAR
VAKTTDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQATGKEIAKEETPAAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttctttaatacccacaaagtggaactcaactggggtggtcagccgctgacgctcgag
acgggcaaggttgcccgccaggccgacggcgccgtcatggcgaccctgggcgagaccgtg
gtgctggccactgtcgtgtcggccaagtccgccaagcccggccaggacttcttcccgctg
accgtcaactaccaggaaaagtacttcgccgccggcaagatcccgggcggctacttcaag
cgtgaaggccgtccgaccgaaaacgagacgctgacctcgcgcctgatcgaccgtccgatc
cgtccgctcttccccgatggctacaagaacgagacccaggtcatcgtcaccgttctccag
catgacatggaaaacgagccagatatcctggccatggtcgccgcttccgctgccctgacc
atttcgggcgtgcccttcatgggcccgatcggcgcggcccgggtcggctatatcgacggc
cagtacgtcctcaacacggccatcgacaagcgcgtcgattccaagctcgacctcgtcatg
gccggcactgccgacgccgtgctgatggttgaatcggaagcccaggagctttccgaggaa
gtgatgctcggggccgtcatgttcggccatgaagcctcgcgcaaggtcatcgaggccatt
atcaagctggccgagcttgccgccaaggatccgcgcgacttcaccgcgcccgattattcg
gcgctcgagaaggacgttctggctgttgccgagaccgacctgcgcgccgcctaccagatc
accaagaaggaagatcgctacgcagcggtcgacgccgccaaggccaaggtgaaggaacac
ttcgcccaggccatcgaagacggcaccgtttcggcagaagctctcggcgaggtcatccat
aacctccaggccaagatcgttcgctggaacatcctggacaccggcaagcgcatcgacggc
cgtgacctggtcaccgtccgcccgatcgtcgctgaagtcggcatcctgccgcgtacgcac
ggctcggccctcttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggcacg
ggcgacgacgagcagttcgtggacagcctggaaggcaccgagaaggtgaacttcatgctg
cactacaacttcccgccctattcggtcggtgagaccggccgcatgggttcgcccggccgc
cgcgaaatcggccacggcaagctcgcctggcgcgccatcaacccgatccgtccgaagtcc
gaagagttcccgtacacgatccgcgtggtctccgagatcaccgagtcgaacggctcctcc
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgcgggcgttcccatgaag
aagccggtcgccggcatcgccatgggcctgatcctggaaggcgaccgctatgcggtgctc
tcggacatcctgggtgacgaagatcacctgggcgacatggacttcaaggttgcgggcacc
gccgacggcgtcacctcgctccagatggacatcaagatcgccggcatcaccgaagagatc
atgaaggtcgctctcggtcaggccaagggcggtcgcgagcacatcctgggcgaaatggcc
aaggccctgaccgccagccgcgacagcgtcggcgaattcgccccgcgcatcgagtcgatc
accattccgaccgacaagatccgtgaagtcatcggttcgggcggcaaggtcatccgcgag
atcgtggaaaagaccggcgccaaggtcgacatcaacgacgacggcaccgtcaaggtctcg
tcctcggacggcaaggcgatcgacgcagccatcaagtggatccgctcgatcaccgatgag
ccggaagtcggccacatctaccagggcaccgtggtcaagaccgccgatttcggcgcgttc
gtgaacttcttcggcgccaaggacggcctcgtccacatctcccagctggccgaagcccgc
gttgccaagaccaccgacgtggtcaaggaaggcgacaaggtctgggtcaagctcctgggc
tttgacgagcgcggcaaggtccgcctctccatgaaggtcgtcgaccaggcgaccggcaag
gaaatcgccaaggaagagaccccggccgccgaataa
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