Devosia sp. D6-9: GHV40_03115
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Entry
GHV40_03115 CDS
T10671
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
devd Devosia sp. D6-9
Pathway
devd00300
Lysine biosynthesis
devd00470
D-Amino acid metabolism
devd01100
Metabolic pathways
devd01110
Biosynthesis of secondary metabolites
devd01120
Microbial metabolism in diverse environments
devd01230
Biosynthesis of amino acids
Module
devd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GHV40_03115 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GHV40_03115 (lysA)
Enzymes [BR:
devd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GHV40_03115 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QMV00547
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Position
complement(599157..600413)
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AA seq
418 aa
AA seq
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MHHFETRDGVLYAEDVPVPELAAKVGTPFYVYSAATLRRHVRVMQEAFEGIPMLLAYAMK
ANSNQAVLKLMAKLGVGADVVSGGELERAIAAGIPANKVVFSGVGKTVAEMRRGLELGIY
CFNVESEPELERLDMIAGDMGKTARVSVRINPDVDAKTHAKISTGKSENKFGIPFARARE
VYNRIADLKNIEAVGVDMHIGSQITDLAPFADAFTLLAELVRNLRADGHKISHVDVGGGL
GIPYYQDEDAPPDPRAYARIVREKLGDLGATLVIEPGRLIVGNAGVLVTKVEYVKEGQKT
FVIVDAAMNDLIRPTLYEAHHDVVPVQQSNLPQITADIVGPVCETGDYLALGRKMAGVTE
GDLLAVMSAGAYGAVMASTYNTRALVPEVLVDGDRWHVIRPRRTIEDLIALDSVPDWL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacttcgagacccgcgacggcgtgctttacgccgaggacgtgcccgtgcccgag
cttgccgccaaggtcggcacgccgttctacgtctattcggcggcaaccctgcgtcgccac
gtgcgcgtgatgcaggaagccttcgagggcataccgatgctcctcgcctatgcgatgaag
gccaactccaaccaggcggtgctcaagctcatggccaagctcggcgtcggcgccgacgtg
gtctcgggcggcgagctggagcgcgctattgccgccggcatcccggctaacaaggtggtg
ttctccggcgtcggcaagacggtggccgagatgcgccgcgggctcgagctggggatctat
tgcttcaacgtcgagagcgagcccgaactcgaacgcctcgacatgatcgccggcgacatg
ggcaagaccgcccgcgtctcggtgcgcatcaaccccgatgtcgatgccaagacccacgcc
aagatttcgaccggcaagtccgagaacaagttcggcatcccttttgcacgtgcccgggaa
gtctataaccgcatcgccgacctcaagaacatcgaggcggtgggcgtggacatgcatatc
ggcagccagatcacggacctggcgccctttgcggacgccttcaccctcctcgccgaactg
gtgcgcaacctgcgcgccgacggccacaagatcagccatgtcgatgtcggcggtggcctg
ggcatcccctactaccaggacgaagacgctccgcccgatccgcgcgcctacgccaggatc
gtgcgcgaaaagctcggtgatctcggtgctacgctggtcatcgagccgggccgcctcatc
gtgggcaatgccggcgtgctggtgaccaaggtggaatacgtcaaggaaggccagaagacc
ttcgtgatcgtcgatgcggcgatgaacgaccttattcgcccgacgctctacgaggcccac
catgacgtggtgccggtgcagcaatccaacctgcctcagatcaccgccgatattgtcggc
ccggtctgcgagacgggcgactacctggcgctcggccgcaagatggccggcgtcacggaa
ggcgacttgctggcagtgatgtcggccggcgcctatggcgcggtcatggcctccacctac
aacacccgcgcactcgtgcccgaagtgctggtggacggcgaccgctggcatgtcatccgc
ccccgccggaccatcgaagacctcatcgcgctcgacagcgttcccgactggctgtga
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