Devosia sp. D6-9: GHV40_04165
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Entry
GHV40_04165 CDS
T10671
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
devd Devosia sp. D6-9
Pathway
devd00061
Fatty acid biosynthesis
devd00071
Fatty acid degradation
devd01100
Metabolic pathways
devd01212
Fatty acid metabolism
devd02024
Quorum sensing
devd04146
Peroxisome
Module
devd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GHV40_04165
00071 Fatty acid degradation
GHV40_04165
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GHV40_04165
09145 Cellular community - prokaryotes
02024 Quorum sensing
GHV40_04165
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
devd01004
]
GHV40_04165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
devd04147
]
GHV40_04165
Enzymes [BR:
devd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GHV40_04165
Lipid biosynthesis proteins [BR:
devd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GHV40_04165
Exosome [BR:
devd04147
]
Exosomal proteins
Exosomal proteins of breast milk
GHV40_04165
Exosomal proteins of breast cancer cells
GHV40_04165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QMV00733
LinkDB
All DBs
Position
complement(810786..812534)
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AA seq
582 aa
AA seq
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MRESAPEDMMASVAETEDHPRPWLSHYPEGIKWELDADFQPVHEQVLAACASEPLAMALD
FLGGTTSFGELARSIISLAGALQKQFGVKKGTRVALMLPNTPFYVISYYAVLRAGGTVVN
CNPLYTVHELSHIASNAQADLMVTLDLKQMFEKAEALVEAGLVKSVIVCHFPEALPLVKR
ALFLLAKRRDLAKIGKSRIAGQVTHFADMLARKETPEPVIIDKHKDIAVQQYTGGTTGLP
KGAMLTHANIAANMAQIDAWGCGLFYPPSKVVAVLPFFHIFAMTACMNVPLCNGTPVIML
PRFELKALIDIFVRTKANVLLAVPTLLQAIAKSDVKPEQIASLEVAVSGGAPLPNEVRAK
FAKVSKALLAEGYGLTEASPVVCCSALRVASKPMSIGLPLPGTDIRFVDIDTGKVQGIGE
PGELQVKGPQVMAGYFNDEEATRNAFMDGWLRTGDVGYVDEDGYVFLVDRIKDLIISSGF
NVYPRTIEEALMEHELVDEVTVIGVPDTYRGEAPIAFVKLVQGATISEAELKTFIAAKLN
KMELPREIIFKEALPKTLIGKLSKKELREEYSQMKGKSREPA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaatccgcgccggaggacatgatggcatctgttgccgagaccgaagatcatccg
cgcccctggctcagccactacccggaagggatcaagtgggagctggatgccgattttcag
cccgtgcacgagcaggtgctggcggcctgcgccagcgagcccttggccatggcgctcgat
ttcctcggcggcacgaccagcttcggggaactggcgcgctcgatcatttcgctggccggc
gcgctccagaaacagttcggagtcaagaagggcacacgcgtggcgctgatgctgcccaat
acccccttctatgtgatctcctattatgcggtgctgcgggccggcggcacggtggtcaat
tgcaacccgctctataccgtccacgagctgagccacatcgcctccaatgcgcaggcggac
ctgatggtcacgctcgatctgaaacagatgttcgaaaaggccgaggcgctggtcgaggcc
ggtctggtcaagtcggtgatcgtttgccacttccccgaggcgctgccgctggtcaagcgc
gcgctattcctcctcgccaagcgccgcgatcttgccaagatcgggaaatcgaggattgcc
ggccaggtcacccatttcgccgacatgctggcgcgcaaggagacgcccgagccggtcatc
atcgacaagcacaaggacatcgccgtccagcaatataccggcggcaccacaggcctgccc
aagggggcgatgctcacccatgccaatattgcggccaatatggcgcagatcgatgcctgg
ggctgcgggcttttctacccgccctccaaggtcgtggcggtactgccgttctttcacatc
ttcgccatgaccgcctgcatgaacgtgccgctctgcaatggcacgccggtgatcatgctg
ccgcgcttcgagctcaaggcgctgatcgatatcttcgtgcgcaccaaggccaatgtgctg
ctggccgtgccgacgctgctgcaggccattgccaagtcggacgtcaagcccgagcagatc
gcgagcctcgaagtcgcggtgtcgggcggcgcgccgctgcccaacgaggtgcgggcgaag
ttcgccaaggtctccaaagcgctgctggccgagggttacgggctgaccgaagcctcgccg
gtcgtctgctgttcggcgctgcgcgtggcctccaagccgatgtcgatcggcctgccgctg
cctggcaccgacatccgcttcgtcgatatcgacaccggcaaggtgcagggcatcggcgag
ccgggtgagttgcaggtcaaggggccgcaggtcatggccggctatttcaacgacgaggag
gcgaccaggaacgccttcatggatggatggctgcggaccggcgatgtcggctatgtcgat
gaggacggctatgtgttcctcgtcgaccgcatcaaggaccttatcatttcctccggcttc
aacgtctatccgcgcaccatcgaggaagcgctgatggagcatgaactggtggacgaggtc
accgtgatcggcgttcccgacacctatcgcggcgaggcgcccatcgccttcgtcaagctc
gtgcaaggggccacgatcagcgaagcggaactcaagaccttcatcgccgccaagctcaac
aagatggagctgccgcgcgagatcatcttcaaggaggcgctgccgaaaacgctgatcggc
aagctctccaagaaggaattgcgggaggaatacagccagatgaaaggcaagagccgtgaa
ccggcctga
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