Devosia sp. D6-9: GHV40_09210
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Entry
GHV40_09210 CDS
T10671
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
devd Devosia sp. D6-9
Pathway
devd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GHV40_09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
devd03021
]
GHV40_09210
03400 DNA repair and recombination proteins [BR:
devd03400
]
GHV40_09210
Enzymes [BR:
devd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GHV40_09210
Transcription machinery [BR:
devd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GHV40_09210
DNA repair and recombination proteins [BR:
devd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GHV40_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Phage_tube_2
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QMV01649
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All DBs
Position
1840648..1841667
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AA seq
339 aa
AA seq
DB search
MTIQRNWQELIKPTKLDIVSGSDNARVASVVAEPLERGYGLTLGNALRRVLLSSLQGAAV
TAIQIDGILHEFSSLPGVREDITDLVLNVKEIAVKMNAEGPKRLTLSKQGPGAVVAGDIK
VSGDIEVLNPELVICHLDDGAEINIEFTVNTGKGYVPADRNRPEDAPIGYIPVDALFSPV
RRVSYKVDATREGQVLDYDKLTLQVETNGAVTPEDAVAYAARILQDQLTVFVNFEEPTKE
KAQDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMDVANWPPENIDDLAKRYEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatccagaggaactggcaggaattaatcaagccgaccaagctggacattgtttcg
ggcagcgataacgcgcgcgtggcttcggtcgtggccgagccgcttgagcgcggctatggt
cttaccctgggcaacgctctgcgtcgcgtgctgctgtcgtccctgcagggcgctgcagtc
accgcgatccagatcgacggcattctgcacgaattctcttcgctccctggcgtgcgcgag
gacattaccgacctcgtcctgaacgtcaaggaaatcgccgtcaagatgaacgccgaaggc
ccgaagcgtctgaccctctccaagcagggtccgggtgccgtggtcgccggcgacatcaag
gtgtcgggcgatatcgaagttctcaatcccgagctcgtgatctgccatctcgacgatggt
gccgagatcaatatcgagttcaccgtcaataccggcaagggctatgtccctgccgaccgt
aaccgtcccgaggacgcgcccatcggctatatccctgtcgatgcgctgttctcgccggtg
cgccgtgtctcctacaaggtcgacgccacccgtgagggccaggtgctcgactacgataag
ctgacccttcaggtcgagaccaacggcgcggtgaccccggaagacgccgtggcttatgcc
gcgcgcatcctccaggaccagctcacggttttcgtcaacttcgaagagccgaccaaggaa
aaggcccaggacaccgtcccggaactcgccttcaatcctgctctgctcaagaaggtggac
gagctggagctctccgtgcgttcggcgaactgcctgaagaacgacaacatcgtgtacatt
ggcgacctcatccagaagaccgaggccgaaatgcttcgcactcccaatttcgggcgcaag
tcgctcaacgaaatcaaggaagtgctggcgcagatgggtctgcatctgggcatggacgtg
gccaactggccgcctgaaaacatcgacgacctcgccaagcgctacgaagatcattattga
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