Devosia sp. D6-9: GHV40_09300
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Entry
GHV40_09300 CDS
T10671
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
devd Devosia sp. D6-9
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
devd03009
]
GHV40_09300 (rimO)
Enzymes [BR:
devd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GHV40_09300 (rimO)
Ribosome biogenesis [BR:
devd03009
]
Prokaryotic type
ribosomal protein modification factors
GHV40_09300 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QMV01664
LinkDB
All DBs
Position
complement(1856542..1857981)
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AA seq
479 aa
AA seq
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MSAPAFCVVDDHARDIPRTIPLSDSNLASKPQDVSAKSGQAPKIGMVSLGCPKALVDSER
ILNTLRAQGYTFSRDYAGSDIVIVNTCGFLDSAKAESLEAIGEAIGENGKVIVTGCLGVE
KELIQKVHPGVLAVTGPHQYEEVVEAVHEHLPPVPNKFVDLLPEQGLRLTPRHYAYLKIS
EGCNNRCSFCIIPQIRGDLVSRPAASVLYEAERLVKSGVKEILVISQDTSAYGLDIKYAT
SPFHGRQVSAKFLDLSRELGELGAWIRLHYVYPYPHVDAVIPLMAEGKVLPYLDIPFQHA
SPTVLKAMRRPANQEKTLDRIKRWREICPDLTIRSNFIVGFPGETDEDFEYLLDWVEEAE
IDRAGCFEYEPVTGAPANDLEGIVPDEVKRERFERLMEVAQDVSTAQLAKKVGRTIEVLV
DDVQPEHNRAIARSKWDAPDIDGTVIIDNATGIKPGDMVEVTVTDSDEYDLFAEPAKAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacccgctttttgcgtggttgatgaccacgccagggacattcccaggaccatt
ccattgagcgacagcaatctggctagcaagccgcaagacgtttccgccaagtcgggccag
gcccccaagatcggcatggtcagcctcggctgccccaaggccctcgtggattccgagcgc
atcctcaacacgctgcgcgcgcagggctacaccttctcgcgcgactatgccggttcggac
atcgtcatcgtcaacacctgcggcttcctcgacagcgccaaggccgaaagcctcgaggcg
atcggtgaagcgatcggcgaaaacggcaaggtgatcgtcaccggctgcctcggcgtcgag
aaggaactcatccagaaggttcatccgggcgtcctggccgtcaccggcccgcaccagtac
gaagaagtggtcgaggcggtgcatgagcacctgcctccggtccccaacaagttcgtggac
ctgctccccgagcagggcctgcgcctcaccccgcgccactacgcttatctcaagatttcc
gaaggctgcaacaatcgctgctcgttctgcatcatcccgcagatccgcggcgacctcgtt
tcgcgcccggccgccagcgtgctttacgaagccgagcggctggtgaagtccggcgtcaag
gaaatcctcgtcatctcgcaggataccagcgcctatggcctggacatcaagtatgcgacc
agccccttccacggtcgccaggtctcggccaagttcctcgatctgtcgcgcgaactgggc
gagctgggcgcgtggattcgcctccactacgtctacccctacccccatgtcgatgctgtc
atcccgctgatggccgagggcaaggtgctgccctatctcgacattccgttccagcacgcg
tccccgaccgtgctcaaggccatgcgccgcccggccaaccaggagaagaccctggaccgg
atcaagcgctggcgcgaaatctgcccggacctcaccatccgctccaacttcatcgtcggc
ttccccggcgaaacggacgaggatttcgagtatctgctcgactgggtcgaggaagccgag
atcgatcgcgcaggctgcttcgaatacgagccggtgaccggcgcgccggccaatgacctt
gaaggcatcgtgcccgacgaggtcaagcgcgaacgcttcgagcgcctcatggaagtggcg
caggacgtttcgactgcgcaactggccaagaaggtcggccgcaccatcgaggtgctggtc
gatgacgtgcagccggagcataaccgcgccattgcccgctccaagtgggacgcgcccgat
atcgacggcacggtcatcatcgacaacgccaccggcatcaagccgggcgacatggtcgaa
gtgaccgtgaccgactcggacgaatacgatctgtttgcggagccggccaaggcgaactga
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