Devosia sp. D6-9: GHV40_12080
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Entry
GHV40_12080 CDS
T10671
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
devd Devosia sp. D6-9
Pathway
devd03030
DNA replication
devd03430
Mismatch repair
devd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GHV40_12080
03430 Mismatch repair
GHV40_12080
03440 Homologous recombination
GHV40_12080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
devd03032
]
GHV40_12080
03400 DNA repair and recombination proteins [BR:
devd03400
]
GHV40_12080
Enzymes [BR:
devd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GHV40_12080
DNA replication proteins [BR:
devd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GHV40_12080
DNA repair and recombination proteins [BR:
devd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GHV40_12080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
NACHT
AAA_5
AAA_16
NPHP3_N
AAA_33
RNA_helicase
nSTAND6
AAA_24
RuvB_N
nSTAND3
SRP54
Motif
Other DBs
NCBI-ProteinID:
QMV02173
LinkDB
All DBs
Position
complement(2468814..2469857)
Genome browser
AA seq
347 aa
AA seq
DB search
MTDDIPIREPDQIDGVLLPEQQHEVYGHEAARTTIMSRLQGGTLPNAVLMHGPQGIGKAT
LAFKLARDIFVATGDEDAHRVDEQVMAGSHPNLFVLRRQPKDGKGFYTVIRVDDIRQLVE
DLRKTRGRAGHRVAIIDSIDDCNASSANALLKILEEPPAETIFLLVSHRPGSLLPTIKSR
CHSLAMRPLADADVRAVLERSPGAEHSQLEAAVGLAHGRPRKGFEAMLVSGDGTLAALRG
WLAGPERFPSGAHLALADAIAAGSDTAEAAFARELVVEWLANEAKSAALQGPAGRIRLAS
ATELWDKAQALFDETDTLNLDMRQTLTVIFDAIKRHLSETLPLSEPS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgatattcccattcgcgagcccgaccagattgatggcgttctgctgcctgaa
cagcagcatgaggtctatgggcatgaggccgcgcgcacgaccatcatgtcgcgcctgcaa
ggcgggactctgcccaatgccgtgctgatgcatggcccgcaggggatcggcaaggcgacg
ctggccttcaagcttgcgcgcgatattttcgtggccacgggagatgaggacgcgcatcgc
gtcgatgagcaggtgatggccggctcgcaccccaaccttttcgtattgaggcgtcagccc
aaggacggcaagggattctatacggtcatccgggtggacgatatccgccagctcgtggaa
gacctgcgcaagacgcggggccgagcgggccatcgcgtcgccatcatcgattcgatcgat
gactgcaatgccagctcggccaatgcgctgctcaagattctggaggagccgccggcggag
acgattttcctcctggtttcgcatcgacctggttctctgttgccgacgatcaagtcgcgg
tgccattcgctggccatgcggccgttggcggatgcggatgtccgtgcggtgctggagcgg
agtcccggtgccgagcattcgcagctcgaggccgcggttggcctggcgcatgggcgacct
cgcaagggcttcgaggccatgctcgtgtcaggcgacgggacgctggcggcgttgcgcggc
tggctcgccggacccgagcggtttccgtcgggtgcgcatctggcactggccgatgcgatc
gcggcgggctcggatacagcagaggcggcgtttgcgcgcgaactcgttgtcgaatggctt
gccaacgaggcaaaatcggcggcactacagggacctgcggggcgtatccgtcttgcctct
gcaaccgagctatgggacaaggcgcaggccctgttcgacgagacagacaccctcaatctc
gacatgcggcagacgcttaccgtcatcttcgatgcgatcaagcgccacctttctgagaca
ttgcccctatccgagccatcatga
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