Devosia sp. D6-9: GHV40_13080
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Entry
GHV40_13080 CDS
T10671
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
devd Devosia sp. D6-9
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GHV40_13080 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
devd03019
]
GHV40_13080 (rnc)
03009 Ribosome biogenesis [BR:
devd03009
]
GHV40_13080 (rnc)
03036 Chromosome and associated proteins [BR:
devd03036
]
GHV40_13080 (rnc)
Enzymes [BR:
devd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GHV40_13080 (rnc)
Messenger RNA biogenesis [BR:
devd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GHV40_13080 (rnc)
Ribosome biogenesis [BR:
devd03009
]
Eukaryotic type
90S particles
RNase
GHV40_13080 (rnc)
Prokaryotic type
rRNA processing factors
GHV40_13080 (rnc)
Chromosome and associated proteins [BR:
devd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GHV40_13080 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QMV02355
LinkDB
All DBs
Position
complement(2673059..2673766)
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AA seq
235 aa
AA seq
DB search
MNTKGRSHQKLEARLGYRFADPDLLDRALTHSSAVSPSKRIERSYQRLEFLGDRVLGLVV
ADMLYRRLPKANEGELSRTLNTLVRKETCAAIAREIDLGPELNLGESEARTGGAEKEAIL
ADVAEAVIGAIYCDGGLGKAFEFIERMFGDRIGVLHADRADAKTTLQEWAQGRGLEPPSY
VIAGRTGPDHAPEFTISVQVGKFEPLTATGASKKIAEHKAAEKFLVREKVWKETL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaagggacgtagtcatcagaaactcgaagcgcgtctgggttatcggttcgcc
gacccggacctgctcgaccgcgcgctgacccattcgagcgccgtttcgccgagcaagcgc
atcgagcgttcctaccagcgcctcgaattcctgggtgaccgcgtgctcgggctcgtggtg
gccgacatgctctaccgccggctgcccaaggccaatgaaggcgagctgtcgcgcacgctt
aatacgctggtgcgcaaggaaacctgcgcggccatcgcccgcgagatcgacctcggcccg
gaactgaacctcggcgagagcgaagcccgcacgggcggcgccgagaaggaagcgatcctt
gccgacgtggcggaagcggtgatcggcgccatctattgcgacggcgggctgggcaaggcg
ttcgagttcatcgagcgcatgttcggcgaccggatcggggtgcttcacgccgaccgcgcc
gacgccaagacgacgttgcaggaatgggcgcagggcaggggtcttgaaccacccagctac
gtcattgccggccgcaccggccccgaccacgcgcccgagttcactatttccgtgcaggtt
ggtaaattcgaaccgctgaccgccaccggcgccagcaagaagatcgccgagcacaaggcg
gccgagaaattcctcgtacgcgagaaagtctggaaggaaactctttga
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