Devosia sp. D6-9: GHV40_20330
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Entry
GHV40_20330 CDS
T10671
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
devd Devosia sp. D6-9
Pathway
devd00521
Streptomycin biosynthesis
devd00523
Polyketide sugar unit biosynthesis
devd00525
Acarbose and validamycin biosynthesis
devd00541
Biosynthesis of various nucleotide sugars
devd01100
Metabolic pathways
devd01110
Biosynthesis of secondary metabolites
devd01250
Biosynthesis of nucleotide sugars
Module
devd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GHV40_20330 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GHV40_20330 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GHV40_20330 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GHV40_20330 (rfbB)
00525 Acarbose and validamycin biosynthesis
GHV40_20330 (rfbB)
Enzymes [BR:
devd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GHV40_20330 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
DUF6301
Motif
Other DBs
NCBI-ProteinID:
QMV03687
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All DBs
Position
4226430..4227482
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AA seq
350 aa
AA seq
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MTILVTGGAGFIGSNFILDWFARSDEPVLNIDKLTYAGNLQNLASVSARKEYFFFRLGIE
ETNKIARLLAAHSVRAIVNFAAESHVDRSISGPEPFFQTNVIGTLRLLEAAREYIESGEA
PADFRFLHVSTDEVFGSLGPNAPAFRETNPFEPNSPYAASKAAADHTVRAYGETYGLPVL
TTHCSNNYGPYQFPEKLIPLVILNAIGGKPLPIYGDGMQVRDWLHVSDHCSALRQVLAKG
ELGETYNIGGNSELPNLAVVQAICAVLDQVRPLPSGKSYAQQITFVRDRPGHDRRYAINA
SKIAKKLGWTPASNFTDGIRSTVGWYLGNPAWVSAVTSGEYRDWIARQYA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcctggttaccggcggcgccgggttcatcggatcgaacttcattctggactgg
ttcgcccgcagcgacgaaccggtcctcaatatcgataagctcacctatgcggggaacctg
cagaacctcgcgagcgtctcagcgcgcaaggaatacttcttcttccgcctcggcatcgag
gaaaccaacaagatcgcccggctgctggccgcacacagcgtgcgcgccatcgtgaatttc
gccgccgaaagccatgtcgaccgctcgatctcgggtcccgagccattcttccagaccaat
gtgatcggcacgctgcgcctcctcgaagcggcgcgcgaatatatcgaaagcggggaggcg
cccgccgatttccgcttcctccacgtttcgaccgacgaggtcttcggctcgctcggcccc
aatgccccggccttccgcgagaccaatcccttcgagcccaacagtccctatgccgcgagc
aaggccgccgccgatcataccgtgcgcgcctatggcgagacttatggcctgccggtgctc
accacgcattgctcgaacaattacgggccctaccagtttcccgaaaagctcattccgctc
gtcatcctcaacgccatcggcggcaagccgctgccgatctatggcgatggcatgcaggtg
cgcgactggctccatgtcagcgaccattgcagcgccctgcgccaggttctggccaagggc
gagctgggcgaaacctacaatatcggcggcaacagcgaattgccgaaccttgcggtcgtc
caggccatctgcgccgtgctcgaccaggtccggccgctgccctcgggcaagtcctacgcc
cagcagatcaccttcgtgcgcgaccggccgggacatgaccggcgctacgcgatcaatgcg
agcaagatcgcaaagaagctcggctggacgcctgcaagcaatttcaccgacggcatccgc
agcaccgtgggctggtatctgggcaatccggcctgggtctcggcggtgacgagcggggaa
taccgggactggatcgccaggcaatatgcctga
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