Devosia sp. D6-9: GHV40_21410
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Entry
GHV40_21410 CDS
T10671
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
devd Devosia sp. D6-9
Brite
KEGG Orthology (KO) [BR:
devd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
devd01002
]
GHV40_21410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
devd01011
]
GHV40_21410
Peptidases and inhibitors [BR:
devd01002
]
Cysteine peptidases
Family C82
GHV40_21410
Peptidoglycan biosynthesis and degradation proteins [BR:
devd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GHV40_21410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QMV03890
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Position
4438754..4440415
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AA seq
553 aa
AA seq
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MIAKRFPVKSLTACALLALTLAYPAIAQETVNVDGTEATRVVIAPPQNDLARSIKTGLAT
AYYGAKDTPAYNAAQKLYYFYGERAFEPLWLTQDASGKLAFSPVADKLVAIFKQAEYEGL
RASDYLTPALDVTSAQGDPARMAGLETAFSQAVMLYAQNLYGGRIDPRKVSANIDIKPRL
LNQPDLLPRLAASDDPAKILAELDPTHREFLALKTALAKFYDGSAAQEQVTIPDGQTLRV
GMVDERVPLLRQRLEVPASEDGTEAVYDKALAEAVTNFQDSLGLLADGIAGPATIAALNG
GSATSKEDIIANMERWRWMPEDLGQFNVFVNIPEFRLAVMKGDDVTYTTRVVVGKAATQT
PIFSDNIRHIVVNPYWNVPPSIASNEIRPALMRNPGYLDAQNMELLYGGKVVNAAMVDWS
TTSMSNFRVRQRPGAGNSLGNVKFLFPNSHDVYLHDTPSKSLFGRSFRAYSHGCVRVQNP
MEFADALLVNEPSGLNSGKLEAMYGPSERWVNLETRVPVHLAYFTLRVDQDGTIRSYGDV
YGHNKKLIELLGG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgattgccaagcgttttcccgtaaagagcctgacggcctgtgccctgctcgcgctgacg
ctggcctaccccgcgatcgcgcaggaaacggtgaacgtggatggcacggaagccacccgc
gtggtcatcgccccgccgcagaacgatctggcccgcagcatcaagacgggccttgccacc
gcctattacggcgccaaggacaccccggcctacaacgcggcgcaaaagctctattacttc
tacggcgaacgcgccttcgagccgctgtggctgacgcaggacgcttcgggcaagctggcc
ttctcgccggtggccgacaagctcgtcgccatcttcaagcaggccgaatacgagggcctg
cgcgcttcggactatctgacgcctgcgctcgacgtgacctcggcgcagggcgacccggcc
cgcatggcagggctcgaaaccgccttctcgcaggcggtgatgctttatgcgcagaacctt
tatggcggccgcatcgacccgcgcaaggtttcggccaatatcgacatcaagccgcgcctg
ctcaaccagccggacctgctgccgcgcctcgccgcgagcgatgatccggccaagatcctg
gccgagctcgaccccacgcatcgcgaattcctggcgctcaagactgcgctggccaagttc
tatgacggttcggccgcccaggagcaggtcacgatcccagacgggcaaacgctgcgcgtg
ggcatggtcgatgagcgcgtgccgctgctgcggcagcgcctcgaagtgccggcgagcgaa
gacggcaccgaagcggtctacgacaaggcgttggccgaggcggtgaccaatttccaggac
agcctggggctgctcgccgacggcattgccggcccggccacgatcgccgcgctcaatggc
ggctcggcgacgagcaaggaagatatcatcgccaatatggagcgctggcgctggatgccc
gaggacctcgggcagttcaacgtcttcgtcaatatcccggaattccgcctggcggtgatg
aagggcgatgacgtgacctatacgacccgcgtcgtggtgggcaaggctgcgacgcagacc
ccgatcttctcggacaatatccgccacatcgtggtgaatccctattggaacgtgccgccc
tccatcgcgagcaacgagatccgtccggcgctgatgcgcaatccgggttatctcgacgcg
cagaacatggaactgctctatggcggcaaggtcgtcaacgcggccatggtcgactggtcg
accacctcgatgagcaatttccgggtgcgccagcgtccgggcgcgggcaattcgctgggc
aacgttaagttcctgttccccaattcgcacgacgtctacctccacgacacgccctccaag
tcgctcttcggccgctccttccgcgcttatagccatgggtgcgtgcgggtgcagaatccg
atggaattcgccgatgcgctgctggtcaacgagccgagcgggctcaattcgggcaagctc
gaagcgatgtacggcccctccgagcgctgggtgaacctggagacccgcgtgccggtgcat
ctggcctatttcacgctgcgcgtggaccaggacggaaccatccggtcctatggcgacgtc
tacgggcacaacaagaagctgatcgagctgctcggcggctga
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