Devosia sp. MC521: H4N61_00020
Help
Entry
H4N61_00020 CDS
T08408
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
devo
Devosia sp. MC521
Brite
KEGG Orthology (KO) [BR:
devo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
devo03032
]
H4N61_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
devo03400
]
H4N61_00020 (gyrB)
Enzymes [BR:
devo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H4N61_00020 (gyrB)
DNA replication proteins [BR:
devo03032
]
Prokaryotic type
DNA Topoisomerases
H4N61_00020 (gyrB)
DNA repair and recombination proteins [BR:
devo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4N61_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
HAUS2
Motif
Other DBs
NCBI-ProteinID:
QMW62800
LinkDB
All DBs
Position
4588..7017
Genome browser
AA seq
809 aa
AA seq
DB search
MSDSENPTPNEYGADSIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALA
GHADLVTVTLNADGSCTVTDNGRGIPVGIHKEEGVSAAEVIMTQLHAGGKFDQNSYKVSG
GLHGVGVSVVNALSVFLKLRIRRDGQIHEMSFTHGDANEPLAVVGEYEGRSGTEVTFLPS
TDTFTMVEFDYKTLEHRLRELAFLNSGVRINLADNRPSEPITTELFYEGGLEAFVSYLDK
GKTPGIDKPIYMISEKDGITVEVALQWNDSYHENVLCFTNNIPQRDGGTHLAGLRGALTR
QVTGYAESSGITKKEKVNLTGDDTREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVEN
IVNEKLGQWFEEHPAEAKAIVMKVVEAASAREAARKARELTRRKGALEISSLPGKLADCQ
ERDPTKSEIFIVEGDSAGGSAKQGRDRSNQAVLPLRGKILNVERARFDRMISSDQVGTLI
TALGTGIGREEFDPDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQTPALLERGHIYIAQ
PPLYKATRGRSELYLKNERALEDYLLENGIEDAVFNTRNGSSHAGADLLSILQQARDITH
AINNLNLRYNRSLVEQAAIVGGLDMEGLTEPAKMQETLTRVSNRLDRISDELERGWTGAV
NDEDALVFSRTVRGVTENHAIDRALLQSADARKLRQMAERLDDLYGGVPTLTRKGDTIPV
YGPGSLFKAVTDFGRKGLSLQRYKGLGEMNAEQLWETTLDPNARTLLRVQLNETAGEADQ
IFTQLMGDLVEPRREFIQENALNVSNLDV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagcgaaaacccgaccccgaatgagtatggtgccgacagcattcgcgtgctg
aaaggcctcgacgcggtgcgtaaacgccccggcatgtacatcggggacacggacgacggt
tcaggcctgcaccacatggtctatgaggtggttgataacgccatcgacgaagctctggcc
gggcacgccgatcttgtgacggtaacgctgaacgcagacggttcttgcaccgtgaccgac
aatggtcgtggtattcctgtgggcatccacaaggaagaaggcgtttcggctgccgaagtg
atcatgacccagctgcacgctggcggtaagttcgaccagaactcctacaaggtttccggt
ggcttgcacggcgtgggcgtgtcggtggtgaacgcgctgtcagtgttcctgaagctgcgc
attcgtcgcgatggtcagatccacgagatgagcttcacccatggcgacgcgaacgagccg
ttggcggtcgtgggcgaatatgaaggtcgctcgggcactgaagtcaccttcttgccaagc
accgacaccttcaccatggtggagtttgattacaagacgctggagcatcgcctgcgcgag
ctcgcgttcttgaattctggcgttcgcatcaatttggcggacaatcgtccgtccgagccg
atcaccaccgagcttttctacgaaggtggtcttgaggccttcgtgtcctatctcgataag
ggtaagacgcccggcatcgacaagcccatctacatgatctcggaaaaagacgggatcaca
gtggaagtggcgctgcagtggaacgacagctaccacgaaaacgtgctgtgtttcaccaat
aacatcccccagcgcgatggcggcacccaccttgcaggtctgcgcggtgcgctgacccgt
caggtgacgggctatgccgaaagctctggcatcaccaagaaggaaaaggtcaatctcact
ggtgatgacacccgtgaaggcttgacctgcgttctttcggtgaaagtgccagatcccaag
ttctcgtcccagaccaaggacaagctggtttcttccgaagttcgcccggtcgttgaaaac
attgtcaacgagaagctcggccaatggtttgaagagcacccggcggaagccaaagccatc
gtcatgaaggtggtggaagcggcgtcggcgcgtgaagcggcgcgcaaggcacgcgagttg
acccgtcgtaagggcgcgctcgaaatttcctcgctccccggcaagcttgcagactgccag
gagcgcgacccgacaaagtctgaaatcttcatcgtggaaggtgactccgcgggtggttcc
gccaagcaggggcgtgatcgctccaatcaggctgtgcttcccctgcgtggtaaaatcctc
aacgtcgaacgcgcacgctttgaccgtatgatctcgtctgatcaggtcggcacgctgatc
acggcgctgggcaccggtattggtcgcgaagagtttgatcctgataagctgcgctatcac
aagatcatcatcatgaccgacgcggacgtcgacggcgcgcatattcgcaccctgttgttg
accttcttctaccgccagaccccagctctgctggaacgtggtcatatctatatcgcgcag
ccgccgctctataaggcaacccgtggccgttccgagctttacctcaagaacgaacgcgcg
cttgaagattacctgcttgaaaatggtattgaagacgctgtctttaacacccgcaacggc
tcaagccatgctggcgctgacctgctttccattctgcagcaggcccgtgacatcacccac
gccatcaacaatctcaacctgcgctacaaccgtagtctggttgagcaggccgcaattgtt
ggcggtttggatatggaagggctgacagaacctgcaaagatgcaggagacgctgacccgc
gtatcaaaccgtctggatcgcatttcggacgagcttgagcgcggttggacgggtgcggtc
aatgacgaggacgcccttgtcttctcgcgcactgttcgcggcgtgaccgagaaccatgcg
attgaccgggcgctgcttcagtccgccgatgcgcgcaagctgcgccagatggccgagcgt
ctcgatgatctctacggcggcgttccgacactgactcgtaagggcgataccattcccgtc
tatggtcccggttcgctgtttaaggctgtcacggactttggccgtaagggcctgtcgctg
cagcgttataaaggtcttggcgagatgaacgccgagcagctatgggaaacgacgctcgat
ccaaatgctcgtactctgctgcgcgttcagctcaatgaaacagccggtgaggccgatcag
attttcactcagttgatgggtgacctggttgaacctcgccgtgaatttattcaggaaaac
gcactgaacgtttctaacctggacgtgtaa
DBGET
integrated database retrieval system
