Devosia sp. MC521: H4N61_00880
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Entry
H4N61_00880 CDS
T08408
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
devo
Devosia sp. MC521
Pathway
devo03030
DNA replication
devo03410
Base excision repair
devo03420
Nucleotide excision repair
devo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
devo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4N61_00880 (polA)
03410 Base excision repair
H4N61_00880 (polA)
03420 Nucleotide excision repair
H4N61_00880 (polA)
03440 Homologous recombination
H4N61_00880 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
devo03032
]
H4N61_00880 (polA)
03400 DNA repair and recombination proteins [BR:
devo03400
]
H4N61_00880 (polA)
Enzymes [BR:
devo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4N61_00880 (polA)
DNA replication proteins [BR:
devo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4N61_00880 (polA)
DNA repair and recombination proteins [BR:
devo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4N61_00880 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4N61_00880 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QMW62956
UniProt:
A0A7G5LLN4
LinkDB
All DBs
Position
complement(175775..178696)
Genome browser
AA seq
973 aa
AA seq
DB search
MHLLLVDGSGYIFRAFFALPQLNRKSDGLPVGCVQGFCNMLFKLTQDMEGDDRPTHMAVI
FDAKGKTFRDQIYDQYKAQRPPAPEELVPQFPLTRSATRAFSIPSIEMEGWEADDILATY
ARMGREQGFKVTIVSSDKDLMQLVEPDGSIRLLDTIARPGQPPLRWIGPDEVFTKFGVTP
DKVIDVQALCGDTVDNVPGVPGIGQKTAAELINTYGDLETLLEKAGEIKQTARRQKLIDN
AELARISKRLVTLSQDVPVELDIDALVRQPMEPSNLFPFLKAMEFATITKRLAAHLDANP
DDFEADPELRAGGDTPLEGVPEKSKSLSVAKAKLAANVVPGTGPARHAAEEHARVKAIPV
NYDAYRIINTEAELAAMIEKIIDKGLVSIDTETTGLDPQSADLVGVCLSTEIGEGIYIPV
GHSKAGDLLEGGGLVDGQLPIRTVLDMLKPVLENPAILKIGQNCKYDMEILANLGIAMAP
IDDTMLISYALDGPRYNGMDVLADHWLEHKTITFGELAGTGKNQKTFDQLEIAAAARYAA
EDADVTLRLWHVLKPRLAAENATTVYETLERPLAPVLARMEARGVSVDRQMLARLSGDFS
QRAAAFEAEAYELAGQSFNLGSPKQLGEILFDKMGLEGGTKTKTGAWSTGADVLEDLAAK
GIPLARTIVDWRQLSKLKSTYTDALPNFINRRTGRVHTSYQQASVLTGRLSSNEPNLQNI
PVRTANGRKIRQAFVAPEGKTLISADYSQIELRVLAHIANIGSLKDAFEEGLDIHAMTAS
EMFGVPVEGMPSDVRRRAKAINFGIIYGISAFGLANQLGIGRGEAGDYIKTYFERFPGIK
DYMEAQKMRVKTDGYVTTIFGRKIQFPNAKSGNPSERAFVERASINAPIQGSAADIIRRA
MIRMEPELAKAGIEADMLLQVHDELIFEVPEGTEDKAIPVIKRVMETASEPAVRLTVPIQ
VDAHAAKNWDEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttgctcgttgatggctcgggctacatcttccgtgccttcttcgccctaccc
cagctgaaccgcaaatctgacggactgcctgtcggctgcgtgcaggggttctgcaatatg
ctgttcaagctcacccaggatatggagggggacgatcgccccacccatatggccgtaatc
tttgacgccaagggcaagaccttccgcgaccagatttatgatcagtataaagcgcagcgc
ccgcctgcacctgaagagctggtgccgcagtttccgctgacccgttcggcgacccgcgct
ttctccatcccctccattgaaatggaaggctgggaagccgacgacattttggcgacctat
gcccgcatgggccgcgagcagggctttaaggtcacgatcgtttcgtcggacaaggatctg
atgcagctggttgagcccgatggttcgatccgcttgctcgacactatcgcccgccccggc
cagccgccgctgcgctggattggccccgatgaagtgttcaccaagtttggcgtgaccccg
gacaaggttatcgacgtgcaggcgctgtgtggcgacacggtcgacaacgtgcccggtgtg
ccgggcattgggcagaagacggctgcagagctgatcaatacctatggcgatctcgaaacg
ctgctggagaaggctggcgaaattaagcaaactgcgcgtcgccagaagctgatcgacaat
gccgaactggcccgtatctccaagcgcctcgtgacgctctcgcaggacgtgccggtggaa
ctcgacatcgacgccttggtgcgtcagccgatggagccgagcaacctcttccctttcctc
aaggcgatggaatttgccaccatcaccaagcgtttggcagcccatctcgatgccaaccca
gatgattttgaggccgaccctgagctccgggctggcggcgacacgccgctggaaggcgtg
ccagaaaaatccaaatccctctccgtcgccaaggccaagcttgcggcaaatgtggttccg
ggcaccggccctgcgcgacacgccgctgaagagcatgcgcgggtaaaagccattccggtc
aattatgatgcctatcgcatcatcaacaccgaagctgagctcgccgcgatgatcgaaaaa
atcatcgacaaggggctcgtctcgatcgacaccgagactaccgggcttgatccgcaatcg
gcggatttggtgggcgtctgtctatcgaccgaaattggtgagggcatctatattccggtt
ggtcacagcaaggctggcgacctgttggaaggcggcggccttgttgatgggcaattgccg
atccgcaccgtgctcgacatgctcaagccggttctggaaaaccctgccattctcaagatc
gggcagaactgcaaatacgatatggagatcttggccaatctcgggatcgctatggccccg
attgatgacaccatgctcatctcttatgcgctcgatggtccgcgctataacggcatggat
gtgttggccgatcattggctcgagcacaaaaccattacctttggtgagctggcggggacc
ggcaagaaccagaagacctttgatcagctcgagattgctgccgcagcgcgctacgccgcc
gaagatgccgacgtaacgctgcgcctctggcatgtgctcaagccacgtctagcagcagaa
aacgccacgacggtttatgaaacgctggagcgcccgctggcgccggttctggcgcgcatg
gaagcgcgtggggtgagcgttgaccggcaaatgctggcgcgcctttcgggcgatttctcc
cagcgcgcggccgcgtttgaagccgaagcctatgagctggccgggcagagctttaatctt
ggctcaccaaaacagcttggcgaaatcctctttgataaaatgggcctcgaaggcggcacc
aagaccaagactggcgcttggtcgaccggcgcggatgtgctcgaagatctcgccgccaag
ggcattccgctggcccgcaccatcgtggattggcgtcagctctccaagctcaagagcacc
tataccgatgctctaccgaattttatcaatcgccggacgggccgcgttcacacctcctat
cagcaggcttccgtgcttacggggcgcttgtcgtcgaacgagccgaacctgcaaaatatt
cccgtgcgtacggcgaacggccgcaagatccgtcaggcctttgtcgcgcccgaaggcaag
acactgatctcggccgactatagccagatcgagctgcgcgttttggcccatatcgccaat
attggatcgctcaaggacgcgttcgaggaaggtctcgatattcacgcgatgacggcttcg
gaaatgtttggcgtgccggtggaaggcatgccgagcgacgtgcgccgtcgcgccaaggcg
atcaactttggcattatctacgggatttcagcttttggtctcgccaatcagctgggtatc
gggcgcggcgaagcgggcgactatatcaagacctatttcgagcgcttcccgggcatcaag
gactatatggaagcccagaagatgcgcgtcaaaaccgacgggtatgtgacaacgatcttt
ggccggaaaatccagttccccaatgcgaaatcgggtaatccatccgaacgcgcctttgtc
gagcgcgcgtcgatcaacgcgcccattcagggctcggcggctgacattatccgtcgcgcc
atgatccgtatggagccagaactggccaaggccgggatcgaggccgacatgctgctgcag
gtgcatgacgaactgatctttgaagttccagagggcactgaggataaggctatcccggtg
atcaagcgggtgatggaaaccgcttcggagcccgccgtgcgcctgaccgtgccgatccaa
gtggacgcgcacgcagccaagaactgggacgaggcgcactaa
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