Devosia sp. MC521: H4N61_08410
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Entry
H4N61_08410 CDS
T08408
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
devo
Devosia sp. MC521
Brite
KEGG Orthology (KO) [BR:
devo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
devo03032
]
H4N61_08410 (topA)
03400 DNA repair and recombination proteins [BR:
devo03400
]
H4N61_08410 (topA)
Enzymes [BR:
devo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4N61_08410 (topA)
DNA replication proteins [BR:
devo03032
]
Prokaryotic type
DNA Topoisomerases
H4N61_08410 (topA)
DNA repair and recombination proteins [BR:
devo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4N61_08410 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
MarR_2
HTH_24
DUF6429
Toprim_4
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
QMW64306
UniProt:
A0A7G5LQI4
LinkDB
All DBs
Position
complement(1762557..1765292)
Genome browser
AA seq
911 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGKDYEVLASFGHVRDLPAKDGSVRPDEDFAMSWEVDTASKK
RLSDISSALKGADGLILATDPDREGEAISWHVLDVLRQKKALKKDMTVQRVVFNAITKDA
VTAAMAKPRDIDMPLVDAYLARRALDYLVGFTLSPILWRKLPGSRSAGRVQSVALRLVSD
REAEIEKFKAEEYWSLEAKLSQSGKSFLARLLSVDGKKTDKLDIKTGENAAELKKLVEAG
QFNVSNVEKKPTKRNPYAPFTTSSLQQDASSRLGLSPSRTMQIAQRLYEDGLITYMRTDA
VQMAPEGIAMARSVIGKYFGDEFLPEKARIYQTKAKNAQEAHEAIRPTDMFKRPEQLHLD
ADQAKLYGLIWRRTLASQMKSAEIDRTTVDISVNVPGRVVGLRATGSVVTFPGFLKLWGV
EAKSDEDNEDEDDRELPPLAVGDKPSLQSVDIEQHFTQPPSRYTEASLIKKMEELGIGRP
STYAATLSTLRDRDYVRLEGKALHPEDRGRIVTAFLESFFNRYVEYGFTAGLEEQLDQVS
AGELEYKVLLRDFWKDFTAATEEIKDLRVSEVLDALNDMLASRIFPPKEDGSDPRVCPTC
GEGQLSLKLGKFGAFIGCSNYPECKHTMQLSDAANGQSSEAMAGDGVLGTDPESGEDVFL
KTGRFGPYVQLGDGKEPKRSSLPKGWDAPSLTLEKALQLLSLPREVGLHPESGLPIQAGL
GRYGPFILHDGKYANLPDVEEVFTVGINRAVDLIAQKAAGGFKRGGGTAVAAIQTFEHDG
GPITVRAGRYGPYVNQGKINATIPKDVAPEAVTLDQAIAWIAARAEVAGTKKKAAPKKAA
AKKPAAKKATTKKAAAAEDGAEKAAPKKRVTKKAAAAAEDGVEPPVKKTAAKKAPAKKAA
PKAIDPEDVPF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgtcgttgaaagtccggctaaagccaagacaatcaacaaatatttaggc
aaggactatgaagttctagcctccttcgggcacgttcgtgacctgccagcgaaggatggt
tcggtacgtccggacgaagattttgccatgtcttgggaggtcgacactgcttcaaaaaag
cggttgagcgatatttcttccgcgctgaagggggccgatggccttattctggcgactgac
cctgatcgcgaaggcgaagccatctcttggcacgttctcgatgttctgcgtcagaagaag
gcgctgaaaaaagatatgacggtgcagcgcgttgtgttcaacgcgatcaccaaggacgcg
gtgacggcggctatggcgaagccgcgtgatatcgatatgccactggtcgacgcctatctg
gcgcgacgcgcactcgactatcttgtcggcttcacgctttccccgattctctggcgcaag
ctgcccggttcgcgttcggcgggccgtgtgcagtctgtggccttgcgcctcgtgtcggac
cgcgaagccgaaatcgaaaaatttaaggccgaagaatattggtcgctggaagccaagctt
tcccaatcgggtaagagcttcttggcgcgccttttgtcggttgacggcaagaaaaccgat
aagctcgatatcaagaccggcgagaatgctgcggagctcaaaaagctcgtcgaggctggc
cagttcaacgtctccaacgttgaaaagaagccaaccaagcgcaatccgtacgcgccgttc
acgacgtcctctctgcagcaggatgcgtcatcgcgtttggggctgtcgccctcgcggacg
atgcagattgcccagcgcctctacgaagacggtctaatcacttatatgcgtaccgacgcc
gtgcagatggcccctgaggggatcgccatggcgcgctcggtcattggcaaatatttcggc
gacgaattcctgccggaaaaggcccgcatttatcagaccaaggccaagaacgcacaggaa
gcgcacgaagcgatccgcccaacggatatgttcaagcgcccagaacagctgcatctcgat
gcggatcaagccaagctttatggtttgatctggcgtcgtacactggcctcgcagatgaaa
tcggctgaaattgaccgcaccacggtcgatatttcggtgaacgtgccgggccgtgtcgtt
ggccttcgtgcgactggctctgttgtcactttcccgggcttcctaaagctctggggcgtt
gaagcgaagtctgacgaagacaacgaagacgaagacgatcgcgagctgccgccactcgca
gttggtgataagccaagccttcagtccgttgatattgaacaacatttcactcagccgccg
agccgttacaccgaggcgagcctgatcaagaagatggaagaactcggcattggccgtcct
tccacctatgctgcaacgctgtcgacactcagggaccgcgattatgtgcggctcgaaggc
aaagcactgcatccggaagatcgcgggcgcattgttaccgctttcctcgaaagcttcttc
aaccgctatgtcgaatatggcttcaccgccggattggaagagcagctcgaccaagtttcg
gcgggtgagctggaatacaaggtgctgctgcgtgatttctggaaggatttcacagcggcc
actgaagagatcaaggatctgcgcgtttcagaggtgcttgacgcactcaacgacatgctc
gcaagccgcattttcccgccaaaggaagacggatcagatccgcgcgtttgcccaacttgt
ggtgaaggccagctttcgctgaagctcggtaaattcggtgcctttattggttgctcgaat
tatcctgagtgcaagcacactatgcagctctcggacgcggccaatggccagagctcggaa
gccatggcaggcgacggcgtgttgggaacggacccagaatcgggcgaggacgtcttcctc
aaaaccggtcgtttcggtccttatgtgcagctcggcgatggcaaagagccaaagcgctca
tcgctgccgaaggggtgggatgcgccatctctgacgcttgaaaaggctctgcaattgctg
agtctgccacgtgaagttggtctgcacccggaaagcggcttgccaatccaagctggtctt
ggtcgctatggaccgttcattctgcatgacggcaaatacgccaatttgccggacgtagaa
gaagtgttcactgttggcatcaaccgtgcggttgatctgatcgcgcagaaggccgctggc
ggctttaagcgtggtggcggcacggctgtggcagccattcaaacatttgagcacgacggt
gggccgattacggttcgcgcgggtcgctatggcccctatgtgaaccagggcaagatcaac
gcgaccattccgaaggatgttgcgccagaggccgtaacgcttgatcaggcgattgcctgg
attgcggcgcgcgctgaagtggcaggtaccaagaagaaggccgcgccgaagaaggcggct
gctaagaagcctgccgctaagaaggcgaccaccaagaaagccgctgcggctgaagatggt
gccgaaaaggctgcgcctaagaagcgtgtaaccaagaaggctgccgctgctgccgaagac
ggggtggaacctccggtcaagaaaactgctgcgaaaaaggccccggcaaagaaggccgcg
ccaaaggcaatcgatccagaagacgtaccgttctga
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