Devosia sp. SD17-2: NYQ88_03520
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Entry
NYQ88_03520 CDS
T11806
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
Organism
devs Devosia sp. SD17-2
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GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
WEJ33895
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Position
694970..697459
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AA seq
829 aa
AA seq
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MSVNLPPIIENWFSSRGWAPRQHQLDVLASYQSGAGQLLIAPTGAGKTLAGFLPTLTDLV
DGNFEGLHTLYLSPLKALAVDVERNLSTPIAEMGLPIRVEARTGDTPASKRARQRTRPPH
VLLTTPEQLALLISHPKAELMFGALKRVVLDELHSLVASKRGDLLALGLARLARMAPDLR
ITALSATIAQPEILRDWIAEPLPQRRTDLLHMVGGARPKLAILETEERLPWAGHSAIYAH
HELYEIIKRHKTTLLFVNTRSQAEMLFQGLWNINDDMLPIALHHGSLSVEQRRKVEAAMA
SGNLKAVVCTSTLDLGIDWGDVDLVVQVGAPKGSSRMLQRIGRANHRLDDPSKALLVPSN
RFEVLECEAAVEAVAEGQQDSEDPLPGGYDVLAQHVLGMACAEPFAADDLYAEVIRAWPY
RDLSREKFDRILDFVATGGYALRAYERYAKLRQTEDGLWRIAHPQVAQQYRLNIGTIVEE
PMVRVRLIRSKAEKRGRTTGPIGAGGRVLGEMEEYFFGTLTPGDTFVFGGEIVAFEGMKD
NEAFVSRAFAKDPKIPSYMGGRFPLSTYLAERVRRIMDSPSEWHKLPDQVADWLRLQRDF
SVLPRRDSLLVETFARGANHFLVCYPFEGRLAHQTLGMLLTRRLERMRAGPLGFVASEYS
LAIWGVGDLSALIRTGRLSLDELFDEDMLGDDLESWLDESALMKRTFRNCAIIAGLIERR
HPGKEKTGRQITMSSDLIYDVLYQHEPDHILIEATRRDAARGLLDIERLGQMLARVRTHI
VHKPLERISPLAVPILLDIGKEPIFGEARESAMAEAADELLRESMGEVF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgtcaacctgccccccatcatcgaaaactggttctcctcccgcggctgggcgccg
cgtcagcatcagctggatgtgctggcttcctatcagtccggcgcgggccaattgctgatt
gcccccactggggcgggcaagacgctggccggtttcctccccacgctcaccgatctcgtc
gacggcaattttgaggggctgcacacgctctatctctcgccgctgaaggcgctggccgtc
gacgtggagcgcaatctttccacccccatcgccgaaatgggcctgcccatccgcgttgag
gcgcgcaccggcgacacccctgcatccaaacgcgcccgccagcgcacgcggcctccgcat
gtgctgctgaccacgcccgagcaattggcgctgctgatttcccatcccaaggccgagctg
atgttcggcgcgctcaagcgcgtggtgctcgacgaactccactcccttgtcgcctcaaag
cgtggcgatcttctagccctcggcctcgcccggctggcgcgcatggcgcccgatctgcgc
atcaccgcgctttcggccaccatcgcccagcccgaaattctccgcgactggatcgccgag
ccgctgccgcagcggcgcaccgatctcctccacatggtcggcggcgcgcggccgaagctg
gctatccttgagaccgaggagcgcctgccctgggccggccattcggccatctatgcccac
catgaactctacgagatcatcaagcgccacaagaccacgctgctcttcgtcaacacgcgc
tcccaggccgaaatgctgttccagggtctctggaacatcaatgacgacatgctgcccatt
gcgctccatcacggctcgctctcggtggagcagcgccgcaaggttgaggccgcgatggcc
tcgggcaatttgaaggccgtcgtctgcacctcgaccctcgatctcggcatcgactggggc
gatgtcgatctcgtcgtgcaggtcggcgcacccaaaggctcctcgcgcatgctgcagcgc
atcggccgcgccaatcaccggctcgatgatccgtcaaaggcgctgctcgtgccctccaat
cgcttcgaagtgctcgaatgcgaggcggccgtcgaggcggtggccgagggccagcaggat
agcgaagaccccctgcccggcggctatgacgtgctcgcccagcatgtgctgggcatggcc
tgcgccgaaccctttgctgccgacgatctctatgccgaggtgatccgcgcctggccctat
cgcgatctctcccgcgaaaaattcgaccgcattctcgatttcgtcgccaccgggggctat
gccctgcgcgcctatgagcgctacgcaaaactgcgccagaccgaggacgggctctggcgc
atcgcccatccgcaggtggcccagcaataccggctcaatatcggcaccattgtcgaagag
cccatggtccgcgtccgcctcatccgcagcaaggccgagaaacgcggccgcaccaccggc
ccgatcggcgcgggcggacgggtgctgggggaaatggaggaatatttcttcggcaccctc
acccccggcgatacttttgtctttggcggcgaaatcgtcgccttcgagggcatgaaggac
aatgaggccttcgtctcccgcgctttcgccaaggacccgaagatcccgagctatatgggc
gggcgctttccgctctcgacctatctggccgagcgcgtgcgccgcatcatggacagcccc
tccgaatggcacaaactgcccgatcaggtggccgactggctgcgcctccagcgcgatttc
tccgttctgccgcgccgcgacagcctgctcgttgaaacctttgcgcgcggggccaatcat
ttccttgtctgctaccccttcgaggggcggctcgcgcatcagaccctgggcatgctgctc
acccgtcggcttgagcgcatgcgcgccggcccgctcggctttgtcgcctccgaatattcc
ctcgccatctggggcgtcggcgatctctcggccctcatccgcaccggcaggctatcgctc
gatgaactgttcgacgaggacatgctgggcgatgatctggaatcctggctcgatgaatcg
gccctgatgaagcgcaccttccgcaattgcgccatcatcgccggcctcatcgagcgccgt
caccccggcaaggaaaagaccggtcgccagatcaccatgagttcggatctcatctacgac
gtgctctatcagcacgagcccgaccatatcctcatcgaagccacccgccgcgacgccgcg
cggggcctcctcgacatcgaacgcctcggccagatgctcgcccgcgtccgcacccacatc
gtccacaaacccctcgaacgcatctccccactcgccgtgcccatcctgctcgacatcggc
aaggagcccatcttcggcgaagcccgcgaaagcgccatggccgaagcggcagacgagctc
ctgcgcgaatccatgggcgaggttttttga
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