Devosia sp. SD17-2: NYQ88_06540
Help
Entry
NYQ88_06540 CDS
T11806
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
Organism
devs Devosia sp. SD17-2
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
WEJ35190
LinkDB
All DBs
Position
complement(1334414..1336600)
Genome browser
AA seq
728 aa
AA seq
DB search
MKKNKARNNEDVSGATTVGVTATVKALEQIILHGRKEVEGSAPWAPHRPERPAKRGASKP
FRLDTTYTPAGDQPTAIAELVEGINNGETDQVLLGVTGSGKTFTAAQVIARTQRPALILA
PNKTLAAQLYSEFKGFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESTINEQIDRMRH
SATRAILERDDVIIVASVSCIYGIGSVEDYTAMTIDVQKGEKIDQRQLLAKLVALQYKRG
DTGFVRGTFRVRGDTVEIFPAHYEAAAWRVSLFGNEVEAITEFDPLTGKKSADLTFIRVY
ANSHHVTPRTTMNQAIKQIKADLAARLQELNGAGRFLEAQRLEQRSLFDLEMMEATGSCA
GIENYSRYFSGRRPGEPPPTLFEYLPDNALVFVDESHVTIGQLGAMYRGDLRRKATLAEY
GFRLPSCMDNRPLRFEEWNAMRPQSVYVSATPGSWEMDQTGGVFAEQVIRPTGLIDPPVE
IRPATHQVDDVIDEIRTTIKAGYRTLVTVLTKKMAEDLTEYMHEQGIRVRYMHSDVDTIE
RIEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAAR
NVDGKVILYADKTTGSMERALAETNRRREKQIAYNEANGITPQSVKARINDIIDSTAERD
HVTISIGKGKDGKEKVVTGDNLATVIKDLEREMREAATNLEFEKAAKLRDEVKRLREMEL
DTLEGEVS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagaacaaggcccgcaacaacgaggacgtctcgggcgccaccactgtcggcgtc
accgccacggtgaaagccctcgagcagatcattctgcacggccgcaaggaagtggaaggc
tccgccccctgggcgccgcatcgccccgagcgcccggccaagcgcggcgcctcaaaaccc
ttccgcctcgacaccacctatacccccgccggcgaccagccgaccgccattgccgagctc
gtggaaggcatcaacaatggcgaaaccgaccaggtcctgctcggcgtcaccggctccggc
aagaccttcaccgccgcccaggtcatcgcccgcacccagcgtccggcgctgatccttgcg
cccaacaagaccctcgccgcccagctctattccgagttcaagggcttcttcccggacaat
gcggtcgagtatttcgtttcctactacgactactaccagccggaagcctacgtcccgcgc
accgacacctacatcgaaaaagaatccaccatcaacgagcagatcgaccgcatgcgccac
tcggcgacccgcgcgatcctcgaacgcgacgacgtcatcatcgtcgcctcggtctcctgc
atctacggtatcggctcggtggaagactacaccgccatgaccatcgacgtgcagaagggc
gaaaagatcgaccagcgccaactgctcgcaaaactcgtggcccttcaatacaagcgcggc
gacaccggcttcgtccgcggcaccttccgggttcgcggcgacaccgtcgaaatcttcccc
gcccactatgaagccgccgcctggcgcgtctccctcttcggcaacgaggtcgaggcgatc
accgaattcgatcccctcaccggcaaaaaatccgccgatctcaccttcatccgcgtctac
gccaattcccaccacgtgacgccgcgcacgacgatgaaccaggccatcaagcagatcaaa
gccgatctcgccgcgcgcctgcaggagctcaacggcgccggccgcttcctcgaagcccag
cgcctcgaacagcgcagcctcttcgatctcgagatgatggaagccaccggctcctgcgcc
ggcatcgagaactattcgcgctacttctccggccgccgccccggcgagccgccgccgacc
ctgttcgaatatctccctgataatgcgctggttttcgtcgacgaaagccacgtcaccatc
ggccagctcggcgccatgtatcgcggcgacctccgccgcaaggcgacgctcgccgaatac
ggcttccgcctgccctcctgcatggacaatcgcccgctccgcttcgaggagtggaacgcc
atgcgcccgcagtcggtctatgtctcggccacccccggctcctgggaaatggaccagacc
ggcggcgtttttgccgaacaggtcatccgccccaccgggctgatcgatcccccggtcgag
atccgcccggccacccatcaggtcgacgacgtcatcgacgagatccgcaccaccatcaag
gccggctaccgcacgctcgtcaccgtcctcaccaagaagatggccgaggatctcaccgaa
tatatgcacgaacagggcattcgcgtgcgctacatgcactcggacgtcgacaccatcgag
cgcattgaaatcattcgcgatctccgcctcggcgccttcgacgtgctggtcggcatcaac
ctcctccgcgaaggcctcgacatccccgaatgcggcctcgtcgccattctcgacgctgac
aaggaagggttcctgcgctcggaaacctcgctcatccagaccatcggccgcgccgcccgt
aacgtcgacggcaaggtcatcctctatgccgacaagaccaccggctcaatggaacgcgcc
ctggccgaaaccaaccgccgccgcgaaaaacagatcgcctacaacgaagccaacggcatc
accccccaatcggtgaaggcccgcatcaacgacatcatcgacagcaccgccgaacgcgac
cacgtcacgatttccattggcaagggcaaggacggcaaggaaaaagtcgtcaccggcgac
aatctcgcgactgtcatcaaagacctcgaacgcgaaatgcgcgaagccgcaacgaacctc
gaattcgaaaaggcggcaaaactgcgcgacgaggtcaagcgcttgcgagagatggaactg
gatacgctggagggagaggtatcgtag
DBGET
integrated database retrieval system
