Devosia sp. SD17-2: NYQ88_15610
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Entry
NYQ88_15610 CDS
T11806
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
devs Devosia sp. SD17-2
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GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
WEJ32309
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All DBs
Position
complement(3177574..3179580)
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AA seq
668 aa
AA seq
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MLTGPTVINCFSSSDGFGQCVQTRLADVGLLPRPPAPPVVADSEEAVGAVSESVVEPEVA
IAEPALDVTPPEAAVAVPENLIAATFGLLRAEPDGSVVIAGSGTPGSEIEVYANGSLLGR
ATVETSGDWVLVPDAPLPAGPLEITLGEKGKTGQAEQSFVVVINEDKKSQPLVVASTPGQ
ASDILQGLERPETAAVAQIAEATPTTQPEAAPASAEQPQTPAENPAVETAPAQPAEPASA
EPSVTATDVPAAQPDAPTPVETAEPENAVAATEEPAAPAETTPAPEATPAATPAETPVVP
ANGVAVAEPVETAEVTQPEAPAEPAAAVEEPAATVPAVQTADAPADAAPATSEPAEEPQT
QVAAVEQPTAPTTAETQAAAPATVPPTIDAIEIEGDRTFFAGAGPDGATVRLYVDNAFIA
DAQVEGGRWLVEAGSVLTKPNQRIRVDLLQRGTATVIGRAEVDFVLELPPGDEPTAVTTA
EQASPQATAEAEEPVVAATTPAETPAQTSEPAASATVETLTVPPATTSETAPSATVAETP
VTQPAAPEAQAVDAPASQPTSTTSTEVAQPATPAIASAETPAVAQAPAVEAEAAPAIPTM
VAVSMGGADAQRFAAGKAIIRRGDNLWTIARRVYGTGMKFTTIYEANTGQIRDPDRIYPG
QVFNLPTE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccggtcccacggtcatcaactgcttttccagcagcgacggttttggtcagtgc
gttcagacgcgccttgccgacgtcggcctcttgccgcgcccgcccgctccaccggtcgtc
gccgatagcgaggaggctgtcggcgccgtatccgaatcggttgtcgagccggaagtggcc
attgccgagcctgcgctcgacgtcacgccgcccgaagcggcggtcgccgtccctgaaaat
ctcattgccgcaacttttggcctgctccgcgccgagcccgatggctctgtcgtcatcgcc
ggcagcggcacgccgggcagcgagatcgaagtctatgccaatggctcgctccttggccgc
gccacggtcgaaaccagcggtgactgggtgctcgtgcccgatgccccgctgcctgctggc
ccgctcgaaatcacccttggtgaaaagggcaagaccggtcaggccgagcagtccttcgtc
gtcgtcatcaacgaagacaagaagagccagccgctcgtcgtcgccagtacgccgggccaa
gccagcgacatcctgcagggtctcgaacgccccgaaactgcggcagtagcccagatcgcc
gaggccacacccacaacccagccggaagccgcccccgccagcgcggaacagccgcagacg
cctgccgaaaatcctgccgtcgaaaccgctcctgcccaaccggcagaacccgcgagcgcc
gaaccgagcgtcaccgcaaccgacgtgccggccgcgcagcctgatgctccgacgcctgtg
gagaccgctgaaccagaaaacgcggtagcagcgaccgaagagcctgccgctccagctgag
acgactcccgctcctgaggctaccccagccgccacgccggctgagacaccagtcgtgcca
gcgaacggcgtagctgtggccgagcccgtcgagactgcggaagtaacccagccggaagct
ccggccgagccggcagccgccgtggaagagcctgcggccaccgttcccgccgtgcagacc
gctgacgctccggcagacgcagcgccagcgaccagcgaaccggccgaagaaccgcagacc
caggttgctgccgtcgaacagccgactgcgccgaccactgccgaaacgcaagctgcggcc
ccggccacggtcccacccaccatcgacgccatcgagatcgagggtgatcgtaccttcttc
gccggtgccggcccagatggggcaactgtccggctctatgtcgacaacgccttcatcgcc
gacgcgcaggtcgagggtgggcgctggctggtggaggctggctcggtcctgaccaagccc
aatcagcgcatccgcgtcgaccttctccagcgtgggacggctaccgtcatcggccgcgcc
gaggtcgatttcgtgctcgagctgccacccggcgacgagccgacggccgtaacaacggcc
gaacaggcatccccgcaggcgactgccgaggctgaagagcctgtcgtcgctgcaaccact
ccggctgaaacaccggcccagaccagtgaacccgccgccagcgcaacagtggaaacgctc
accgtgcctccggccacgacgagcgagaccgcaccatctgctactgtggctgaaactccg
gtgacgcagcccgctgcaccagaggcgcaagctgtcgacgcgcctgcaagccagccaacg
tcaacgacttctaccgaagttgcccaacctgcaacgccggcaatcgcgagcgccgaaacc
cccgcagttgcccaggccccagccgtggaagccgaggcggcgccggccattccaaccatg
gtggccgtctccatgggtggtgccgatgcccagcgctttgccgccggcaaggccatcatc
cggcgtggcgacaatctctggaccatcgcccgccgcgtctatggcacgggcatgaagttc
accactatctacgaggccaacaccggccagattcgcgacccggatcggatctatcccggt
caggtgttcaacctgcccacggaatga
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