Dehalogenimonas sp. WBC-2: DGWBC_0115 Help Entry DGWBC_0115        CDS       T03938                                  Symbol ligD Name (GenBank) ATP-dependent DNA ligase LigD   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism dew  Dehalogenimonas sp. WBC-2 Pathway dew03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:dew00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     DGWBC_0115 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dew03400]     DGWBC_0115 (ligD) Enzymes [BR:dew01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      DGWBC_0115 (ligD) DNA repair and recombination proteins [BR:dew03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      DGWBC_0115 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  AKG52805 UniProt:  A0A0F7CTE9 LinkDB All DBs Position complement(95517..96530) Genome browser AA seq 337 aa AA seqDB search MTAVVSIQLKVCYGIVSIPELLWIARNNIYWYIGFMADRISTTLDGHQFEISNTDKVLFP DDGITKGQLIQYYLKIAPVMLPYLQDRPLSFQRFPDGIGGEGFYQKSTPEYYPPWIKRAP LPGEKDTTLYAIADSKAALVYFTQQAVITHHTWLSRTDKPHNPDLIVFDLDPQTNDFNSV RETAFGLRDLLSELGLTSYVKTTGSRGLHIVVPIDRKAEFNQVKTFAHETAVLLENRHPE TLTTEVRIAKRGTRIFIDTARNNYAQTAVAPYSVRARRGATVAVPITWEELEDKNLNSAS YNIDTLFGLLSIRPDPWRNIYKHAQSLDKAEKLLKKR NT seq 1014 nt NT seq  +upstreamnt  +downstreamnt atgacggcagtagtatccatccaactcaaagtctgttacggcatagtttcaataccagaa cttctctggatagcgcgtaataatatttactggtatattggattcatggctgacagaatt tccaccacacttgatggtcatcagtttgagatttccaataccgacaaagtccttttccct gatgacggtattaccaaggggcagcttattcaatactaccttaaaattgccccggttatg ctgccgtaccttcaagaccgtccgttatcgttccagcgctttccagacggtatcggggga gaaggtttttaccaaaaatcgactcctgaatactatccaccatggatcaagcgagcacca ctccctggtgaaaaagacaccaccctttatgccatcgccgactcgaaggcagcacttgtg tacttcacacagcaggcggtgataacccaccatacatggttgtctcgcactgacaaaccc cataatcctgacctgattgtctttgatctggaccctcaaaccaatgatttcaattctgta agagagaccgcctttggcttacgagatctactttccgaacttgggctaacgagttatgtc aagactaccggatcacgggggctgcacatcgtggtgccaatagaccggaaagcggaattc aatcaggtcaagaccttcgcccatgaaacagcggttctattagaaaatcgccacccagaa accctcaccaccgaggttcgtattgccaaacgcggtacccggatatttattgacacggca cgcaataactacgcccaaacggcggtagctccctattcagtgcgggccagaagaggcgct accgtggcagtaccgatcacctgggaagaactggaagacaaaaacctcaattcagccagc tataatattgacactctttttggattgttatcgatacggcctgatccctggcggaacata tacaagcacgctcaatcattggataaagcagaaaaacttcttaaaaaaagataa

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