Dehalogenimonas sp. WBC-2: DGWBC_0240
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Entry
DGWBC_0240 CDS
T03938
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dew
Dehalogenimonas sp. WBC-2
Pathway
dew03030
DNA replication
dew03410
Base excision repair
dew03420
Nucleotide excision repair
dew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGWBC_0240
03410 Base excision repair
DGWBC_0240
03420 Nucleotide excision repair
DGWBC_0240
03440 Homologous recombination
DGWBC_0240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dew03032
]
DGWBC_0240
03400 DNA repair and recombination proteins [BR:
dew03400
]
DGWBC_0240
Enzymes [BR:
dew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGWBC_0240
DNA replication proteins [BR:
dew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DGWBC_0240
DNA repair and recombination proteins [BR:
dew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DGWBC_0240
NER (nucleotide excision repair)
GGR (global genome repair) factors
DGWBC_0240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DUF6882
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AKG52927
UniProt:
A0A0F7GDS7
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All DBs
Position
221457..224195
Genome browser
AA seq
912 aa
AA seq
DB search
MNKPSLVLFDASALVHRAYHAFKYSQQLSISKTGEVTSAVFGFTNILLKVLNDVKPDCYA
IAFDRKGPTFRHELSTAYKAHRPETPPELIAQMSRVRQMVEAFGIPVFEQQGYEADDLLG
TLACRAKDAGAEVIIVTGDADAMQLVNESVKVLYPKPGGTFSDTMVYDAEAVMGKFGVPP
HRVADYKALVGDASDNISGVPGVGQKTAVKLLSEFDGIDAIYENIELIKPEKLRELLRRE
EAAARQSLILATIVTDLPIQFVLDECRISLFERDKVIPLLRELEFTSLINRLPQSGGVKE
TKASMAPVIQEHPVVECRYTLVDTVEKLAVLAKKLSNIEKLAIDTETTGLDTLSADLVGL
SLAPAAGEGYYLPVGHVGVAGAQLELSQVIKMLGGIIADKNIPKIAHNAKFDLQILSRAG
FTVKGLSFDTMLAAHLLGEKTLSLKGLAFSRLGVEMTPITMLIGEGKNQKCISGCELQET
ADYACADADMTFRLAELLAPELDRENQRKLFTEVEMPLVPIIGDMESAGIAIDADMLAKM
SLRLGDQLAALEKEIHEHAGHPFNIASPKQLGEVLFGELHLPSGRKTQTGFCTDAAVLDE
LKDQHAIVRLILEYRTLSKLKSTYVDTLPQMVNMCDRRLHTSFNQARTATGRLSSSEPNL
QNIPVRGELGREIRKAFVAPPGYLLLAADYSQIDLRALAHLSGDADLVKAFENDEDIHMT
TATRLYNVSPGQVTPDMRRFAKTINFGVIYGMSGYGLEQATELSREESSRFIKTYFERYP
GVTAYLEATKEQARSHGYVETILGRRRYIPDINASNRQVREAAERMAINMPVQGTSADII
KVAMLHVRREMDERKLKSRLLLQVHDELIFEVPQSELIFMSELAPRLMSGAVKLKVPLKV
DLKYGANWGEME
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcccagtctagtcctttttgatgccagtgcattggttcaccgggcctaccat
gcttttaagtacagccagcaactttcaataagcaagaccggtgaggtgaccagcgccgtt
tttgggtttaccaatatacttctcaaggtgcttaacgatgtaaaacccgattgctatgcc
attgcttttgaccgcaaaggtccgacattcaggcacgaactttcgacagcatataaagcc
catcggcccgaaacgcctcctgaactcattgcccagatgagcagggtcaggcagatggtg
gaagcttttggcataccggtctttgagcagcaaggttatgaagccgatgatctattgggc
acacttgcctgccgggctaaagacgccggagcagaggtaatcattgttactggtgacgcc
gacgctatgcaactggtaaatgagtcggtcaaggtgctataccccaagcccggtggtact
ttttccgatactatggtctatgatgcggaagcggtgatgggcaaattcggggtgccgccg
caccgggtggctgattataaagcactcgtcggcgatgcctccgacaatatttccggtgtc
cccggcgtcggacagaaaacagcggttaagctgctctccgagtttgacggcattgatgcc
atctatgaaaacatagaattgatcaaaccggaaaaactgcgcgaactgctccggcgtgaa
gaggcggcggcgcggcaaagcctgatactggcaaccatagttactgatcttccgatacaa
tttgtccttgatgagtgccgtatcagcctttttgaacgtgacaaagttattccgctactg
cgggaattggaattcacatctctgatcaaccgtctgccgcaatccggcggagttaaagaa
acaaaggcttccatggcccctgttatccaggaacatcctgtcgttgagtgccgctatacg
ctcgtagataccgttgaaaagctggccgtacttgcgaaaaaactatctaatatcgaaaaa
ctggctattgatacagagaccaccggtcttgacaccctttcggcagatctggttggattg
tcattggccccggccgcgggagaaggttattatctgccggtaggtcatgttggtgtcgcc
ggcgcccaattagaacttagccaggttattaaaatgctgggcggcattatagctgataaa
aatatccccaaaatcgctcataatgccaaatttgatcttcagatacttagccgggctggt
tttacggtaaagggtctcagttttgataccatgctggcggcccatctgctgggtgaaaaa
acgctatcgcttaagggattggctttcagccgcctgggtgtagagatgactcctattact
atgcttatcggtgaaggtaaaaatcagaaatgtatctccggatgtgaacttcaggaaacc
gcggattatgcctgtgccgatgcggatatgaccttccgtctggcggaacttttggctccg
gaactggaccgggaaaatcagcggaagctgtttactgaggtggaaatgccgctggtgccg
attatcggggatatggaaagcgccggtatcgctattgacgccgatatgctggcaaaaatg
tcattgcgcctgggcgaccagttggcagcgcttgaaaaagaaatccacgagcatgccggt
catccatttaatatagcctcacccaaacagttgggtgaagtgctctttggtgagttacat
ttgccttcgggtcgtaagacccaaaccgggttttgtactgacgcagcggtgctggatgaa
ctcaaagaccagcacgcaattgtccggctgatactggaataccgcaccttatccaagttg
aaatcaacttatgttgatactttaccgcagatggtgaatatgtgcgacaggcggctgcat
accagtttcaatcaggcgcgcaccgccaccggccggttgtcatccagcgaacctaatttg
cagaatattcctgtgcgcggtgaactgggaagggagatcagaaaagcctttgtggctccg
ccgggttacctgctgctggctgctgattattctcagattgatctgcgggcgctggcgcat
ttatcaggcgatgctgatttggttaaagcttttgagaatgatgaagacattcacatgacg
acggctaccaggctgtataatgtgtctcccggtcaggtaactccggatatgagacgtttt
gccaagactatcaatttcggggtaatttatggcatgagcggctacggtctggaacaagcc
accgaactttcccgtgaggaatcttccaggttcatcaagacctattttgagcgttatccc
ggcgttacagcctatcttgaagctaccaaagagcaggctcgctcacacggttacgttgag
acgatactaggccgacggcgttatattccagacatcaatgcttctaaccgtcaggttcgt
gaagcggcggaacgcatggcgatcaatatgccggtgcagggaacatcggcggatatcatc
aaggtggccatgctgcatgtcagacgggagatggacgagcgcaagctcaaaagccggctg
ttactacaggtgcatgatgaacttatctttgaagtgcctcagtctgaactcatcttcatg
tcagaattagcgccgaggctgatgtcaggcgcggtcaagctgaaggtgccgttaaaagta
gatctgaaatacggcgccaattggggagaaatggaataa
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