Dehalogenimonas sp. WBC-2: DGWBC_0921
Help
Entry
DGWBC_0921 CDS
T03938
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dew
Dehalogenimonas sp. WBC-2
Brite
KEGG Orthology (KO) [BR:
dew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dew03400
]
DGWBC_0921
DNA repair and recombination proteins [BR:
dew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DGWBC_0921
Archaeal homologous recombinant proteins
DGWBC_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_29
AAA_21
AAA_27
Rad50_zn_hook
TPD52
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKG53584
UniProt:
A0A0F7GEB1
LinkDB
All DBs
Position
882313..884904
Genome browser
AA seq
863 aa
AA seq
DB search
MIPVRLKLKNFLPYRGDLPAFSFDGIHLACISGDNGSGKTSIIDAITWALWGKSRLRSKS
TSDDDLITQGEYETSVTFDFRAGDSQVYRVERRRTKPKRAGGAGQSALNLFIDSKEGFKT
VSGNTIGETEERIKNILHLDYETFINSAYLKQGEADHFTELRPSDRKEVLAKILGLDIYD
QLAENAKHKASDAAATKNLLSDSIGLEQQQLERRPELEAALQMAQNELSDSEAALNQKRS
TLDGLRNAKQLLESQETTLQQSESTVKDIEADIHARQSDKAEMAKRIIAHQVVLSGRQAI
EEGFAQYQNARRLNDEFNQKLGELRRIEKRRDTHEKAITEIRHKLELTRDRWQVALDDLK
TKAARVEVTKQSLYELKLEIEKLAAGERQMEIERQTLNTLNIQLATLTAEETGHQRHLAE
IAEKSGLLVKAAEAICPVCEAELHEDRLEMVQAKYAADRTATQSRINEIAAAKAEQMAQI
TALERHLATDTSLKADQAKLTVREARLLQEIDEAENAARRLPEGERQINSLTLEIARAEY
APDEQKLISVLDAEIKALDYDIKAHERANSETKTLEAFEHRYRELTEADKMLASEEIALR
KTEYAIASLEERLATRRLEVLKNKTLLDKLPRIDPAELTRTESEVKALAAVMSAASERVG
SLKQGLIHLDELKTRLADKASDLKRYAAEESLYKELQQAFGKNGIQAILIENAIPEMESE
ANRLLARMTDNRMSLKIEPMRATKKGDMIETFDIMIADELGTRDYDLFSGGEAFRINFAL
RLALSRLLAHRAGAPLRTLIIDEGFGTQDASGIEKLKEAISSIQNQFDCILVITHIEEFK
DAFPARIEVFKTADGSSIKVSYN
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgataccagtccgcctgaaactcaagaatttcctgccttatcgcggtgacctgcccgcc
ttttcgtttgatgggattcatcttgcatgcatttctggcgacaacggcagcggtaaaacg
tctataattgatgccatcacctgggcgctctggggcaagtcacggctgcggagcaagtcc
acctcagatgacgacctcataactcagggtgagtatgagacatcagtcacctttgatttc
agggctggagacagtcaggtttaccgtgttgagcgccggcgtactaaaccgaaacgtgcc
ggtggtgcagggcaaagcgctcttaacctcttcatagattccaaagaaggtttcaagact
gtttccggcaatactataggtgaaaccgaggagagaattaagaatatccttcatcttgat
tatgagacattcattaacagtgcctatctgaaacaaggtgaagccgaccattttaccgaa
ctccgccccagcgatcgcaaagaggtattggccaagatcttaggtttggatatttatgat
caactagccgagaatgccaaacacaaagccagtgacgccgctgcgaccaaaaatcttctc
tctgacagcatcgggttggaacaacagcaactcgaacgaaggccagagttggaagcggct
ctgcagatggctcaaaatgaactgtccgacagtgaggctgccctcaaccagaaacgtagc
actcttgacggtctgcgaaacgcaaaacaattacttgagtcacaagagacaactttgcaa
cagtcggaatcgacggttaaagacatagaagcggacattcatgcgaggcagtctgataaa
gccgagatggctaaacgcattatagcgcatcaggttgtactctctggccgtcaagccatt
gaagaaggctttgctcaataccagaacgcccgccgccttaacgatgaattcaatcaaaaa
ctaggcgaattacgccgaatagaaaagcgccgtgatacccacgaaaaagcaatcaccgaa
attaggcataaactggaactcacccgtgaccgctggcaagtcgctctggatgatttgaag
accaaagcggccagagttgaagttaccaagcagtctctctatgaactgaagctggaaatc
gagaaacttgctgccggggaacggcagatggaaatagagaggcaaacacttaacactctc
aatattcaactggccactctgaccgcagaggaaacaggccatcagcggcatctggctgag
atcgccgagaaatcggggttgctcgtcaaggcggccgaggctatatgtcctgtgtgtgag
gcagagcttcatgaggaccgtttggaaatggtccaggcaaaatacgccgccgaccgtacc
gcaacacaaagccgcatcaacgaaatcgccgctgccaaagcagagcaaatggcgcagatc
accgcattggaacgacatctggcaacagatacctctctcaaagctgaccaagctaaattg
accgtccgtgaagctagactgcttcaagagattgatgaagcggaaaatgccgccagacgg
cttcccgaaggtgagagacaaattaacagcttaaccttagagatagctcgcgctgaatat
gctcctgatgaacaaaagctcatctcagtgctggacgcggagataaaggctttagattac
gatataaaggcccatgaaagggcaaattcagaaacaaaaacgctggaggctttcgagcat
cgatatcgtgaactcactgaggccgataaaatgctggcttcagaggaaatcgctttgcgg
aaaaccgagtatgccatagcaagcctggaagaacggctggcaacgcgtcgtttggaagtt
ctaaaaaacaaaactctgcttgataaactgccgcgtatcgaccccgctgaattgacccgg
actgaatctgaggttaaagcgctggcggcggtcatgagtgccgcctcggagcgggtaggc
agcttgaaacaaggtctcattcatctggatgaacttaaaaccagacttgccgataaagca
tctgaccttaaacgatatgccgccgaagaaagcctttataaggagctgcaacaagccttt
ggcaaaaacggcatccaggccattcttattgaaaacgctatacctgaaatggaatcagag
gcaaaccggctgctggccaggatgaccgacaaccgtatgagtcttaagattgagccgatg
agagccaccaaaaaaggtgatatgatcgaaacctttgacatcatgatcgctgatgaactg
ggcacgcgtgattatgacctgttcagcggtggagaggccttccgcatcaatttcgcctta
cggctggcactatcccgtttgttggcccatcgcgccggcgctcccttacggacgcttatt
attgacgagggtttcggcactcaggacgcctctggaatcgaaaaattgaaggaggctata
tccagcatccagaatcagttcgattgtatcctggtcatcacccacattgaggagttcaag
gatgctttcccggcccgcattgaagtcttcaagaccgcggacggcagcagtatcaaggta
agttacaactaa
DBGET
integrated database retrieval system
