Dehalogenimonas sp. WBC-2: DGWBC_1542
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Entry
DGWBC_1542 CDS
T03938
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dew
Dehalogenimonas sp. WBC-2
Pathway
dew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DGWBC_1542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dew03019
]
DGWBC_1542
Enzymes [BR:
dew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DGWBC_1542
Messenger RNA biogenesis [BR:
dew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DGWBC_1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AKG54176
UniProt:
A0A0F7GEU8
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All DBs
Position
1489056..1490330
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AA seq
424 aa
AA seq
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MSFENFNLHPALLDAVKALGYTEPTPIQAQAIPPALEGRDVIGLAQTGTGKTASFVLPIL
QKILRSPFEKPRAGQPRKLRALIIAPTRELAEQIYDTCKDLSKFTGIRAMAIYGGVGMEP
QKSKIRAGVDIVIACPGRLLDHVWQGSIDFRDVEMLIIDEADRMFDMGFLPDIHKILKCL
MKERQTLLYSATMPDDVRKLVHEITNNPVTIQIGQVAPAVTVAHALYPVHHDLKTSLLKI
LLGDITGSVLVFTRTKHRTERVALSLAQDGHSVASIQGNLSQYRRQTALDGFKNGTFKIL
VATDIAARGIDVADVSHVINYDMPETADAYIHRIGRTGRIGKSGDAFTFVTAEDEPMVRS
LERLLKSPIERRSVEGFKYDVREAPKNEFARPPRPGRQATATNSGNSNRKVPSWRRPSSR
RQPV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgaaaatttcaatcttcatcccgctctcctggatgctgttaaagctctgggt
tataccgaaccaacccctatccaagcgcaagccatcccgccggcattagaaggccgcgac
gtcatcggcttggctcagaccggcaccggcaaaacagcgtcttttgtattacccatcctg
caaaaaatccttcgcagcccttttgaaaagccgagggcgggccagccgcggaagttacgc
gcgctgattattgcaccaacccgggagcttgccgaacaaatatatgacacttgtaaagac
ctctccaagtttaccggcatccgtgccatggctatatatggcggtgtcggtatggaaccg
caaaaaagtaaaatccgtgccggtgtggatattgttatcgcctgccccggccgcttactg
gaccatgtatggcaaggcagcattgatttcagagacgtagaaatgctgatcattgacgag
gctgaccgtatgtttgatatgggtttcctgccggatatccacaaaatccttaagtgtctc
atgaaagagcgccaaacgttgttatattcagccactatgcctgatgacgtcaggaaattg
gtacatgaaatcaccaataacccggtaactatacagatcggtcaggtagccccggcggtc
acagtggctcacgctctttatcccgtacatcatgacctcaagacatcgctccttaagata
ttgctgggcgatattaccggttcggtgctggtctttactcgcaccaaacaccgtacggaa
cgtgtagcgctatctctcgcccaggatggtcacagcgttgcgtcaattcaaggtaatcta
tcccaataccgacggcaaaccgctctcgatgggttcaagaatggtaccttcaagattttg
gtagccacggacatcgccgcacgaggtatagatgttgcggatgtctctcatgttatcaac
tacgatatgccggaaaccgccgatgcctatattcaccgtatcggcagaaccgggcgtatc
ggtaagagcggcgatgccttcacctttgtcactgccgaagatgaacctatggttcgctcc
ctggaacgtttgttgaaatcacccattgagcgccgtagcgttgagggtttcaaatatgat
gtccgtgaagcacccaaaaacgagtttgccagaccacctcgtccgggcagacaggcgacg
gcgaccaactccggaaattccaatcgcaaggttccctcatggcgccgtccttcatcccgg
cgacaacctgtataa
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