KEGG   Dehalogenimonas sp. WBC-2: DGWBC_1542
Entry
DGWBC_1542        CDS       T03938                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
dew  Dehalogenimonas sp. WBC-2
Pathway
dew03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dew00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DGWBC_1542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dew03019]
    DGWBC_1542
Enzymes [BR:dew01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DGWBC_1542
Messenger RNA biogenesis [BR:dew03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DGWBC_1542
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_19
Other DBs
NCBI-ProteinID: AKG54176
UniProt: A0A0F7GEU8
LinkDB
Position
1489056..1490330
AA seq 424 aa
MSFENFNLHPALLDAVKALGYTEPTPIQAQAIPPALEGRDVIGLAQTGTGKTASFVLPIL
QKILRSPFEKPRAGQPRKLRALIIAPTRELAEQIYDTCKDLSKFTGIRAMAIYGGVGMEP
QKSKIRAGVDIVIACPGRLLDHVWQGSIDFRDVEMLIIDEADRMFDMGFLPDIHKILKCL
MKERQTLLYSATMPDDVRKLVHEITNNPVTIQIGQVAPAVTVAHALYPVHHDLKTSLLKI
LLGDITGSVLVFTRTKHRTERVALSLAQDGHSVASIQGNLSQYRRQTALDGFKNGTFKIL
VATDIAARGIDVADVSHVINYDMPETADAYIHRIGRTGRIGKSGDAFTFVTAEDEPMVRS
LERLLKSPIERRSVEGFKYDVREAPKNEFARPPRPGRQATATNSGNSNRKVPSWRRPSSR
RQPV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgagtttcgaaaatttcaatcttcatcccgctctcctggatgctgttaaagctctgggt
tataccgaaccaacccctatccaagcgcaagccatcccgccggcattagaaggccgcgac
gtcatcggcttggctcagaccggcaccggcaaaacagcgtcttttgtattacccatcctg
caaaaaatccttcgcagcccttttgaaaagccgagggcgggccagccgcggaagttacgc
gcgctgattattgcaccaacccgggagcttgccgaacaaatatatgacacttgtaaagac
ctctccaagtttaccggcatccgtgccatggctatatatggcggtgtcggtatggaaccg
caaaaaagtaaaatccgtgccggtgtggatattgttatcgcctgccccggccgcttactg
gaccatgtatggcaaggcagcattgatttcagagacgtagaaatgctgatcattgacgag
gctgaccgtatgtttgatatgggtttcctgccggatatccacaaaatccttaagtgtctc
atgaaagagcgccaaacgttgttatattcagccactatgcctgatgacgtcaggaaattg
gtacatgaaatcaccaataacccggtaactatacagatcggtcaggtagccccggcggtc
acagtggctcacgctctttatcccgtacatcatgacctcaagacatcgctccttaagata
ttgctgggcgatattaccggttcggtgctggtctttactcgcaccaaacaccgtacggaa
cgtgtagcgctatctctcgcccaggatggtcacagcgttgcgtcaattcaaggtaatcta
tcccaataccgacggcaaaccgctctcgatgggttcaagaatggtaccttcaagattttg
gtagccacggacatcgccgcacgaggtatagatgttgcggatgtctctcatgttatcaac
tacgatatgccggaaaccgccgatgcctatattcaccgtatcggcagaaccgggcgtatc
ggtaagagcggcgatgccttcacctttgtcactgccgaagatgaacctatggttcgctcc
ctggaacgtttgttgaaatcacccattgagcgccgtagcgttgagggtttcaaatatgat
gtccgtgaagcacccaaaaacgagtttgccagaccacctcgtccgggcagacaggcgacg
gcgaccaactccggaaattccaatcgcaaggttccctcatggcgccgtccttcatcccgg
cgacaacctgtataa

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